(15 nodes) Mixed, incl. Domain in neuralized proteins, and Positive regulation of neuromuscular synaptic transmission network (Tetraodon nigroviridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3BVL2_TETNG	Pleckstrin homology domain containing, family F (with FYVE domain) member 2. (246 aa)
	H3C0V3_TETNG	Receptor-associated protein of the synapse, 43kD. (350 aa)
	Q4RCI4_TETNG	Chromosome undetermined SCAF18853, whole genome shotgun sequence. (64 aa)
	H3CDG5_TETNG	TOX high mobility group box family member 4 b. (639 aa)
	PACS1	Phosphofurin acidic cluster sorting protein 1a. (878 aa)
	H3CR67_TETNG	TOX high mobility group box family member 4 a. (657 aa)
	H3CT37_TETNG	Zgc:110006. (285 aa)
	H3CUA3_TETNG	Neuralized E3 ubiquitin protein ligase 1B. (529 aa)
	H3D617_TETNG	RING-type domain-containing protein. (216 aa)
	H3D724_TETNG	Uncharacterized protein. (562 aa)
	H3D9I3_TETNG	Neuralized E3 ubiquitin protein ligase 1Aa. (543 aa)
	H3DDQ0_TETNG	Family with sequence similarity 43 member A. (344 aa)
	H3DI91_TETNG	Pleckstrin homology domain containing, family H (with MyTH4 domain) member 2. (1470 aa)
	H3DPN5_TETNG	Pleckstrin homology domain containing, family H (with MyTH4 domain) member 1. (1441 aa)
	Q4RCR4_TETNG	Chromosome undetermined SCAF18230, whole genome shotgun sequence. (113 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3BVL2_TETNG	H3CR67_TETNG	ENSTNIP00000000024	ENSTNIP00000010751	Pleckstrin homology domain containing, family F (with FYVE domain) member 2.	TOX high mobility group box family member 4 a.	0.446
H3BVL2_TETNG	H3CUA3_TETNG	ENSTNIP00000000024	ENSTNIP00000011837	Pleckstrin homology domain containing, family F (with FYVE domain) member 2.	Neuralized E3 ubiquitin protein ligase 1B.	0.546
H3BVL2_TETNG	H3DDQ0_TETNG	ENSTNIP00000000024	ENSTNIP00000018643	Pleckstrin homology domain containing, family F (with FYVE domain) member 2.	Family with sequence similarity 43 member A.	0.545
H3BVL2_TETNG	H3DI91_TETNG	ENSTNIP00000000024	ENSTNIP00000020235	Pleckstrin homology domain containing, family F (with FYVE domain) member 2.	Pleckstrin homology domain containing, family H (with MyTH4 domain) member 2.	0.558
H3C0V3_TETNG	H3CUA3_TETNG	ENSTNIP00000001869	ENSTNIP00000011837	Receptor-associated protein of the synapse, 43kD.	Neuralized E3 ubiquitin protein ligase 1B.	0.530
H3C0V3_TETNG	H3D724_TETNG	ENSTNIP00000001869	ENSTNIP00000016315	Receptor-associated protein of the synapse, 43kD.	Uncharacterized protein.	0.530
H3C0V3_TETNG	H3D9I3_TETNG	ENSTNIP00000001869	ENSTNIP00000017174	Receptor-associated protein of the synapse, 43kD.	Neuralized E3 ubiquitin protein ligase 1Aa.	0.530
H3C0V3_TETNG	Q4RCR4_TETNG	ENSTNIP00000001869	ENSTNIP00000023066	Receptor-associated protein of the synapse, 43kD.	Chromosome undetermined SCAF18230, whole genome shotgun sequence.	0.530
H3CDG5_TETNG	PACS1	ENSTNIP00000006288	ENSTNIP00000010248	TOX high mobility group box family member 4 b.	Phosphofurin acidic cluster sorting protein 1a.	0.647
H3CR67_TETNG	H3BVL2_TETNG	ENSTNIP00000010751	ENSTNIP00000000024	TOX high mobility group box family member 4 a.	Pleckstrin homology domain containing, family F (with FYVE domain) member 2.	0.446
H3CR67_TETNG	H3DI91_TETNG	ENSTNIP00000010751	ENSTNIP00000020235	TOX high mobility group box family member 4 a.	Pleckstrin homology domain containing, family H (with MyTH4 domain) member 2.	0.446
H3CT37_TETNG	H3CUA3_TETNG	ENSTNIP00000011421	ENSTNIP00000011837	Zgc:110006.	Neuralized E3 ubiquitin protein ligase 1B.	0.553
H3CT37_TETNG	H3D724_TETNG	ENSTNIP00000011421	ENSTNIP00000016315	Zgc:110006.	Uncharacterized protein.	0.553
H3CT37_TETNG	H3D9I3_TETNG	ENSTNIP00000011421	ENSTNIP00000017174	Zgc:110006.	Neuralized E3 ubiquitin protein ligase 1Aa.	0.553
H3CT37_TETNG	Q4RCR4_TETNG	ENSTNIP00000011421	ENSTNIP00000023066	Zgc:110006.	Chromosome undetermined SCAF18230, whole genome shotgun sequence.	0.553
H3CUA3_TETNG	H3BVL2_TETNG	ENSTNIP00000011837	ENSTNIP00000000024	Neuralized E3 ubiquitin protein ligase 1B.	Pleckstrin homology domain containing, family F (with FYVE domain) member 2.	0.546
H3CUA3_TETNG	H3C0V3_TETNG	ENSTNIP00000011837	ENSTNIP00000001869	Neuralized E3 ubiquitin protein ligase 1B.	Receptor-associated protein of the synapse, 43kD.	0.530
H3CUA3_TETNG	H3CT37_TETNG	ENSTNIP00000011837	ENSTNIP00000011421	Neuralized E3 ubiquitin protein ligase 1B.	Zgc:110006.	0.553
H3CUA3_TETNG	H3D617_TETNG	ENSTNIP00000011837	ENSTNIP00000015957	Neuralized E3 ubiquitin protein ligase 1B.	RING-type domain-containing protein.	0.647
H3CUA3_TETNG	H3DDQ0_TETNG	ENSTNIP00000011837	ENSTNIP00000018643	Neuralized E3 ubiquitin protein ligase 1B.	Family with sequence similarity 43 member A.	0.535