STRINGSTRING
H3CLC4_TETNG H3CLC4_TETNG H3CPN9_TETNG H3CPN9_TETNG Q4SNE2_TETNG Q4SNE2_TETNG H3DAL8_TETNG H3DAL8_TETNG Q4RM21_TETNG Q4RM21_TETNG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H3CLC4_TETNGMitochondrial ribosomal protein L45. (244 aa)
H3CPN9_TETNGMitochondrial ribosomal protein L48. (205 aa)
Q4SNE2_TETNGChromosome 8 SCAF14543, whole genome shotgun sequence. (131 aa)
H3DAL8_TETNGMitochondrial ribosomal protein L39. (322 aa)
Q4RM21_TETNGChromosome 10 SCAF15019, whole genome shotgun sequence. (176 aa)
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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