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H3BZJ7_TETNG H3BZJ7_TETNG H3C768_TETNG H3C768_TETNG H3C896_TETNG H3C896_TETNG H3CBD8_TETNG H3CBD8_TETNG Q4T891_TETNG Q4T891_TETNG H3CE95_TETNG H3CE95_TETNG H3CGY9_TETNG H3CGY9_TETNG Q4T029_TETNG Q4T029_TETNG H3CKN0_TETNG H3CKN0_TETNG Q4SQY6_TETNG Q4SQY6_TETNG H3CPR4_TETNG H3CPR4_TETNG H3CQL5_TETNG H3CQL5_TETNG H3CUT3_TETNG H3CUT3_TETNG Q4SGV0_TETNG Q4SGV0_TETNG H3CWQ4_TETNG H3CWQ4_TETNG H3D2E9_TETNG H3D2E9_TETNG H3D557_TETNG H3D557_TETNG H3D5X9_TETNG H3D5X9_TETNG H3DCY8_TETNG H3DCY8_TETNG H3DF97_TETNG H3DF97_TETNG SNRPC SNRPC H3DR39_TETNG H3DR39_TETNG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H3BZJ7_TETNGSplicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
H3C768_TETNGSmall nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (104 aa)
H3C896_TETNGSplicing factor 3a, subunit 1. (676 aa)
H3CBD8_TETNGSmall nuclear ribonucleoprotein-associated protein. (238 aa)
Q4T891_TETNGSmall nuclear ribonucleoprotein G. (76 aa)
H3CE95_TETNGCPSF_A domain-containing protein. (131 aa)
H3CGY9_TETNGSplicing factor 3b, subunit 3. (1088 aa)
Q4T029_TETNGSmall nuclear ribonucleoprotein Sm D3. (127 aa)
H3CKN0_TETNGNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
Q4SQY6_TETNGSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
H3CPR4_TETNGSplicing factor 3b, subunit 2. (815 aa)
H3CQL5_TETNGSmall nuclear ribonucleoprotein polypeptide A. (273 aa)
H3CUT3_TETNGSplicing factor 3b, subunit 4. (391 aa)
Q4SGV0_TETNGChromosome 14 SCAF14590, whole genome shotgun sequence. (125 aa)
H3CWQ4_TETNGSplicing factor 3a, subunit 3. (503 aa)
H3D2E9_TETNGSmall nuclear ribonucleoprotein Sm D2. (109 aa)
H3D557_TETNGSmall nuclear ribonucleoprotein polypeptide F. (86 aa)
H3D5X9_TETNGPHD finger protein 5A. (110 aa)
H3DCY8_TETNGSplicing factor 3a, subunit 2. (289 aa)
H3DF97_TETNGDEAD (Asp-Glu-Ala-Asp) box polypeptide 46. (1016 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (161 aa)
H3DR39_TETNGSplicing factor 3b, subunit 1. (430 aa)
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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