STRINGSTRING
H3BZJ7_TETNG H3BZJ7_TETNG H3CPR4_TETNG H3CPR4_TETNG H3CUT3_TETNG H3CUT3_TETNG Q4SGV0_TETNG Q4SGV0_TETNG H3D5X9_TETNG H3D5X9_TETNG H3DR39_TETNG H3DR39_TETNG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H3BZJ7_TETNGSplicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
H3CPR4_TETNGSplicing factor 3b, subunit 2. (815 aa)
H3CUT3_TETNGSplicing factor 3b, subunit 4. (391 aa)
Q4SGV0_TETNGChromosome 14 SCAF14590, whole genome shotgun sequence. (125 aa)
H3D5X9_TETNGPHD finger protein 5A. (110 aa)
H3DR39_TETNGSplicing factor 3b, subunit 1. (430 aa)
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.