6 items (Tetraodon nigroviridis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Q4T1E2_TETNG	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (128 aa)
	H3DD70_TETNG	Valosin containing protein; Belongs to the AAA ATPase family. (804 aa)
	H3DHB3_TETNG	UBX domain protein 1. (293 aa)
	H3DLD9_TETNG	N-glycanase 1. (636 aa)
	H3DP20_TETNG	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (249 aa)
	RAD23B	RAD23 homolog B, nucleotide excision repair protein. (346 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3DD70_TETNG	H3DHB3_TETNG	ENSTNIP00000018463	ENSTNIP00000019907	Valosin containing protein; Belongs to the AAA ATPase family.	UBX domain protein 1.	0.971
H3DD70_TETNG	H3DLD9_TETNG	ENSTNIP00000018463	ENSTNIP00000021337	Valosin containing protein; Belongs to the AAA ATPase family.	N-glycanase 1.	0.893
H3DD70_TETNG	H3DP20_TETNG	ENSTNIP00000018463	ENSTNIP00000022269	Valosin containing protein; Belongs to the AAA ATPase family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.988
H3DD70_TETNG	Q4T1E2_TETNG	ENSTNIP00000018463	ENSTNIP00000007697	Valosin containing protein; Belongs to the AAA ATPase family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.846
H3DD70_TETNG	RAD23B	ENSTNIP00000018463	ENSTNIP00000022573	Valosin containing protein; Belongs to the AAA ATPase family.	RAD23 homolog B, nucleotide excision repair protein.	0.708
H3DHB3_TETNG	H3DD70_TETNG	ENSTNIP00000019907	ENSTNIP00000018463	UBX domain protein 1.	Valosin containing protein; Belongs to the AAA ATPase family.	0.971
H3DHB3_TETNG	H3DLD9_TETNG	ENSTNIP00000019907	ENSTNIP00000021337	UBX domain protein 1.	N-glycanase 1.	0.928
H3DHB3_TETNG	H3DP20_TETNG	ENSTNIP00000019907	ENSTNIP00000022269	UBX domain protein 1.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.963
H3DHB3_TETNG	Q4T1E2_TETNG	ENSTNIP00000019907	ENSTNIP00000007697	UBX domain protein 1.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.816
H3DHB3_TETNG	RAD23B	ENSTNIP00000019907	ENSTNIP00000022573	UBX domain protein 1.	RAD23 homolog B, nucleotide excision repair protein.	0.699
H3DLD9_TETNG	H3DD70_TETNG	ENSTNIP00000021337	ENSTNIP00000018463	N-glycanase 1.	Valosin containing protein; Belongs to the AAA ATPase family.	0.893
H3DLD9_TETNG	H3DHB3_TETNG	ENSTNIP00000021337	ENSTNIP00000019907	N-glycanase 1.	UBX domain protein 1.	0.928
H3DLD9_TETNG	H3DP20_TETNG	ENSTNIP00000021337	ENSTNIP00000022269	N-glycanase 1.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.927
H3DLD9_TETNG	Q4T1E2_TETNG	ENSTNIP00000021337	ENSTNIP00000007697	N-glycanase 1.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.631
H3DLD9_TETNG	RAD23B	ENSTNIP00000021337	ENSTNIP00000022573	N-glycanase 1.	RAD23 homolog B, nucleotide excision repair protein.	0.974
H3DP20_TETNG	H3DD70_TETNG	ENSTNIP00000022269	ENSTNIP00000018463	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Valosin containing protein; Belongs to the AAA ATPase family.	0.988
H3DP20_TETNG	H3DHB3_TETNG	ENSTNIP00000022269	ENSTNIP00000019907	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	UBX domain protein 1.	0.963
H3DP20_TETNG	H3DLD9_TETNG	ENSTNIP00000022269	ENSTNIP00000021337	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	N-glycanase 1.	0.927
H3DP20_TETNG	Q4T1E2_TETNG	ENSTNIP00000022269	ENSTNIP00000007697	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.985
H3DP20_TETNG	RAD23B	ENSTNIP00000022269	ENSTNIP00000022573	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	RAD23 homolog B, nucleotide excision repair protein.	0.667