STRINGSTRING
H3BWC7_TETNG H3BWC7_TETNG H3CFQ4_TETNG H3CFQ4_TETNG H3CFH1_TETNG H3CFH1_TETNG H3CF87_TETNG H3CF87_TETNG H3CDK2_TETNG H3CDK2_TETNG H3CBJ4_TETNG H3CBJ4_TETNG H3C9Y3_TETNG H3C9Y3_TETNG H3C9G4_TETNG H3C9G4_TETNG H3C8U5_TETNG H3C8U5_TETNG USB1 USB1 H3C3S7_TETNG H3C3S7_TETNG H3C0J0_TETNG H3C0J0_TETNG H3C0G9_TETNG H3C0G9_TETNG H3BWU4_TETNG H3BWU4_TETNG H3BWP1_TETNG H3BWP1_TETNG H3DNT1_TETNG H3DNT1_TETNG H3DNI2_TETNG H3DNI2_TETNG H3DJR5_TETNG H3DJR5_TETNG H3DJE5_TETNG H3DJE5_TETNG PLD4 PLD4 H3DJ68_TETNG H3DJ68_TETNG CPSF3 CPSF3 H3DI20_TETNG H3DI20_TETNG Q4RPP8_TETNG Q4RPP8_TETNG MGME1 MGME1 H3DEN8_TETNG H3DEN8_TETNG H3DCD4_TETNG H3DCD4_TETNG H3D9S2_TETNG H3D9S2_TETNG H3D6H6_TETNG H3D6H6_TETNG H3D5X1_TETNG H3D5X1_TETNG H3D5U1_TETNG H3D5U1_TETNG H3D568_TETNG H3D568_TETNG H3D565_TETNG H3D565_TETNG PAN2 PAN2 H3D476_TETNG H3D476_TETNG H3D242_TETNG H3D242_TETNG H3D1K8_TETNG H3D1K8_TETNG H3CZE5_TETNG H3CZE5_TETNG H3CV57_TETNG H3CV57_TETNG H3CT44_TETNG H3CT44_TETNG H3CS48_TETNG H3CS48_TETNG H3CS46_TETNG H3CS46_TETNG dis3l2 dis3l2 H3CQA7_TETNG H3CQA7_TETNG PNPT1 PNPT1 H3CMW0_TETNG H3CMW0_TETNG H3CJR5_TETNG H3CJR5_TETNG H3CH68_TETNG H3CH68_TETNG H3CGP2_TETNG H3CGP2_TETNG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H3BWC7_TETNGRAD1 homolog (S. pombe). (192 aa)
H3CFQ4_TETNGCCR4-NOT transcription complex, subunit 6a. (563 aa)
H3CFH1_TETNGExonuclease 1. (427 aa)
H3CF87_TETNGDecapping mRNA 2. (349 aa)
H3CDK2_TETNGDNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (475 aa)
H3CBJ4_TETNGExonuclease 3'-5' domain containing 2. (546 aa)
H3C9Y3_TETNGCleavage and polyadenylation specific factor 3. (686 aa)
H3C9G4_TETNG5'-3' exoribonuclease 1. (1715 aa)
H3C8U5_TETNGEndo/exonuclease/phosphatase domain-containing protein. (170 aa)
USB1U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (247 aa)
H3C3S7_TETNGExosome component 10. (869 aa)
H3C0J0_TETNGUncharacterized protein. (151 aa)
H3C0G9_TETNGDouble-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (671 aa)
H3BWU4_TETNGAprataxin. (342 aa)
H3BWP1_TETNGUncharacterized protein. (577 aa)
H3DNT1_TETNGPhospholipase D family, member 3. (457 aa)
H3DNI2_TETNGDNA cross-link repair 1A (PSO2 homolog, S. cerevisiae). (440 aa)
H3DJR5_TETNGTarget of EGR1, exonuclease. (430 aa)
H3DJE5_TETNGPhosphodiesterase 12. (588 aa)
PLD4Phospholipase D family member 4. (314 aa)
H3DJ68_TETNGAngel homolog 1 (Drosophila). (385 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (694 aa)
H3DI20_TETNGDIS3 exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (947 aa)
Q4RPP8_TETNGChromosome 12 SCAF15007, whole genome shotgun sequence. (553 aa)
MGME1Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair. Belongs to the MGME1 family. (344 aa)
H3DEN8_TETNGDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2294 aa)
H3DCD4_TETNGDNA cross-link repair 1B. (310 aa)
H3D9S2_TETNGNocturnin. (380 aa)
H3D6H6_TETNGCell cycle checkpoint control protein; Belongs to the rad9 family. (387 aa)
H3D5X1_TETNGAP_endonuc_2 domain-containing protein. (241 aa)
H3D5U1_TETNGMethionine sulfoxide reductase B1b. (469 aa)
H3D568_TETNGDNA cross-link repair 1C, PSO2 homolog (S. cerevisiae). (616 aa)
H3D565_TETNGExoribonuclease 1. (325 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1213 aa)
H3D476_TETNGNocturnin. (330 aa)
H3D242_TETNGDNA polymerase. (1097 aa)
H3D1K8_TETNGUncharacterized protein. (183 aa)
H3CZE5_TETNG5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (951 aa)
H3CV57_TETNGEndo/exonuclease/phosphatase domain-containing protein. (372 aa)
H3CT44_TETNGSmall fragment nuclease. (226 aa)
H3CS48_TETNGPoly(A)-specific ribonuclease (deadenylation nuclease). (628 aa)
H3CS46_TETNGExonuclease domain-containing protein. (527 aa)
dis3l2DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. (817 aa)
H3CQA7_TETNGCCR4-NOT transcription complex, subunit 8. (287 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (747 aa)
H3CMW0_TETNGAngel homolog 2 (Drosophila). (380 aa)
H3CJR5_TETNGDNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (308 aa)
H3CH68_TETNGTatD DNase domain containing 1. (127 aa)
H3CGP2_TETNGDIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (925 aa)
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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