(5 nodes) Serine C-palmitoyltransferase complex network (Tetraodon nigroviridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3CK68_TETNG	Uncharacterized protein. (115 aa)
	H3CH35_TETNG	Aminotran_1_2 domain-containing protein. (153 aa)
	Q4RTJ2_TETNG	ORM1-like protein; Negative regulator of sphingolipid synthesis. (153 aa)
	Q4S5V3_TETNG	Chromosome 9 SCAF14729, whole genome shotgun sequence. (153 aa)
	H3CQJ6_TETNG	Serine palmitoyltransferase, small subunit B. (76 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3CH35_TETNG	H3CK68_TETNG	ENSTNIP00000007563	ENSTNIP00000008647	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.900
H3CH35_TETNG	H3CQJ6_TETNG	ENSTNIP00000007563	ENSTNIP00000010530	Aminotran_1_2 domain-containing protein.	Serine palmitoyltransferase, small subunit B.	0.807
H3CH35_TETNG	Q4RTJ2_TETNG	ENSTNIP00000007563	ENSTNIP00000018791	Aminotran_1_2 domain-containing protein.	ORM1-like protein; Negative regulator of sphingolipid synthesis.	0.821
H3CH35_TETNG	Q4S5V3_TETNG	ENSTNIP00000007563	ENSTNIP00000015505	Aminotran_1_2 domain-containing protein.	Chromosome 9 SCAF14729, whole genome shotgun sequence.	0.821
H3CK68_TETNG	H3CH35_TETNG	ENSTNIP00000008647	ENSTNIP00000007563	Uncharacterized protein.	Aminotran_1_2 domain-containing protein.	0.900
H3CK68_TETNG	H3CQJ6_TETNG	ENSTNIP00000008647	ENSTNIP00000010530	Uncharacterized protein.	Serine palmitoyltransferase, small subunit B.	0.807
H3CK68_TETNG	Q4RTJ2_TETNG	ENSTNIP00000008647	ENSTNIP00000018791	Uncharacterized protein.	ORM1-like protein; Negative regulator of sphingolipid synthesis.	0.821
H3CK68_TETNG	Q4S5V3_TETNG	ENSTNIP00000008647	ENSTNIP00000015505	Uncharacterized protein.	Chromosome 9 SCAF14729, whole genome shotgun sequence.	0.821
H3CQJ6_TETNG	H3CH35_TETNG	ENSTNIP00000010530	ENSTNIP00000007563	Serine palmitoyltransferase, small subunit B.	Aminotran_1_2 domain-containing protein.	0.807
H3CQJ6_TETNG	H3CK68_TETNG	ENSTNIP00000010530	ENSTNIP00000008647	Serine palmitoyltransferase, small subunit B.	Uncharacterized protein.	0.807
Q4RTJ2_TETNG	H3CH35_TETNG	ENSTNIP00000018791	ENSTNIP00000007563	ORM1-like protein; Negative regulator of sphingolipid synthesis.	Aminotran_1_2 domain-containing protein.	0.821
Q4RTJ2_TETNG	H3CK68_TETNG	ENSTNIP00000018791	ENSTNIP00000008647	ORM1-like protein; Negative regulator of sphingolipid synthesis.	Uncharacterized protein.	0.821
Q4S5V3_TETNG	H3CH35_TETNG	ENSTNIP00000015505	ENSTNIP00000007563	Chromosome 9 SCAF14729, whole genome shotgun sequence.	Aminotran_1_2 domain-containing protein.	0.821
Q4S5V3_TETNG	H3CK68_TETNG	ENSTNIP00000015505	ENSTNIP00000008647	Chromosome 9 SCAF14729, whole genome shotgun sequence.	Uncharacterized protein.	0.821