(18 nodes) Polysaccharide binding network (Tetraodon nigroviridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3D3Y7_TETNG	EPM2A glucan phosphatase, laforin. (315 aa)
	H3DLB9_TETNG	Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b. (1534 aa)
	H3DMP5_TETNG	Protein phosphatase 1 regulatory subunit. (335 aa)
	H3DMX1_TETNG	Pentraxin 3, long b. (397 aa)
	H3DN29_TETNG	Protein phosphatase 1 regulatory subunit. (282 aa)
	H3CJ64_TETNG	Ig-like domain-containing protein. (194 aa)
	H3CJ30_TETNG	Vitronectin a. (479 aa)
	H3CEM8_TETNG	Uncharacterized protein. (351 aa)
	H3CA24_TETNG	Protein phosphatase 1 regulatory subunit. (307 aa)
	H3C7T0_TETNG	Protein O-mannose kinase. (284 aa)
	H3C4D9_TETNG	CBM21 domain-containing protein. (87 aa)
	H3BYW3_TETNG	Vitronectin b. (465 aa)
	H3BWF1_TETNG	Protein phosphatase 1, regulatory subunit 3Da. (288 aa)
	H3CLB1_TETNG	Zgc:77112. (190 aa)
	POMK	Protein O-mannose kinase. (285 aa)
	H3CV60_TETNG	CBM21 domain-containing protein. (181 aa)
	H3CZF7_TETNG	Glycerophosphocholine phosphodiesterase 1. (673 aa)
	H3DL89_TETNG	Proteoglycan 4b. (501 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3CA24_TETNG	H3CV60_TETNG	ENSTNIP00000005096	ENSTNIP00000012144	Protein phosphatase 1 regulatory subunit.	CBM21 domain-containing protein.	0.900
H3CA24_TETNG	H3DMP5_TETNG	ENSTNIP00000005096	ENSTNIP00000021793	Protein phosphatase 1 regulatory subunit.	Protein phosphatase 1 regulatory subunit.	0.902
H3CA24_TETNG	H3DN29_TETNG	ENSTNIP00000005096	ENSTNIP00000021927	Protein phosphatase 1 regulatory subunit.	Protein phosphatase 1 regulatory subunit.	0.905
H3CV60_TETNG	H3CA24_TETNG	ENSTNIP00000012144	ENSTNIP00000005096	CBM21 domain-containing protein.	Protein phosphatase 1 regulatory subunit.	0.900
H3CV60_TETNG	H3DMP5_TETNG	ENSTNIP00000012144	ENSTNIP00000021793	CBM21 domain-containing protein.	Protein phosphatase 1 regulatory subunit.	0.900
H3CV60_TETNG	H3DN29_TETNG	ENSTNIP00000012144	ENSTNIP00000021927	CBM21 domain-containing protein.	Protein phosphatase 1 regulatory subunit.	0.900
H3D3Y7_TETNG	H3DLB9_TETNG	ENSTNIP00000015225	ENSTNIP00000021317	EPM2A glucan phosphatase, laforin.	Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.	0.556
H3DLB9_TETNG	H3D3Y7_TETNG	ENSTNIP00000021317	ENSTNIP00000015225	Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.	EPM2A glucan phosphatase, laforin.	0.556
H3DMP5_TETNG	H3CA24_TETNG	ENSTNIP00000021793	ENSTNIP00000005096	Protein phosphatase 1 regulatory subunit.	Protein phosphatase 1 regulatory subunit.	0.902
H3DMP5_TETNG	H3CV60_TETNG	ENSTNIP00000021793	ENSTNIP00000012144	Protein phosphatase 1 regulatory subunit.	CBM21 domain-containing protein.	0.900
H3DMP5_TETNG	H3DN29_TETNG	ENSTNIP00000021793	ENSTNIP00000021927	Protein phosphatase 1 regulatory subunit.	Protein phosphatase 1 regulatory subunit.	0.900
H3DN29_TETNG	H3CA24_TETNG	ENSTNIP00000021927	ENSTNIP00000005096	Protein phosphatase 1 regulatory subunit.	Protein phosphatase 1 regulatory subunit.	0.905
H3DN29_TETNG	H3CV60_TETNG	ENSTNIP00000021927	ENSTNIP00000012144	Protein phosphatase 1 regulatory subunit.	CBM21 domain-containing protein.	0.900
H3DN29_TETNG	H3DMP5_TETNG	ENSTNIP00000021927	ENSTNIP00000021793	Protein phosphatase 1 regulatory subunit.	Protein phosphatase 1 regulatory subunit.	0.900