(73 nodes) Clathrin binding network (Tetraodon nigroviridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3C638_TETNG	Uncharacterized protein. (190 aa)
	H3C4A3_TETNG	Epsin 2. (574 aa)
	H3C447_TETNG	Synaptosome associated protein 91b. (553 aa)
	H3D4U9_TETNG	Synaptotagmin IIa. (424 aa)
	H3D539_TETNG	Synaptotagmin Ia. (315 aa)
	H3D542_TETNG	Synaptotagmin X. (532 aa)
	H3D5T4_TETNG	Target of myb1 like 2 membrane trafficking protein; Belongs to the TOM1 family. (502 aa)
	H3D7E9_TETNG	DAB adaptor protein 2. (747 aa)
	H3D886_TETNG	Leucine-rich repeat kinase 2. (2521 aa)
	H3D8H6_TETNG	Synaptotagmin IXa. (519 aa)
	EPN3	Epsin 3. (570 aa)
	H3D9K5_TETNG	Huntingtin interacting protein 1. (1005 aa)
	H3DD68_TETNG	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1683 aa)
	H3DEG9_TETNG	Huntingtin interacting protein 1 related b. (1091 aa)
	H3DEJ4_TETNG	AP complex subunit beta. (935 aa)
	H3DEV8_TETNG	Cyclin G associated kinase. (1292 aa)
	H3DF73_TETNG	Synaptotagmin VIIa. (673 aa)
	H3DFE4_TETNG	Clathrin interactor 1b. (664 aa)
	H3DFH1_TETNG	Phosphatidylinositol binding clathrin assembly protein b. (649 aa)
	H3BX68_TETNG	Uncharacterized protein. (1042 aa)
	H3BZL5_TETNG	AP-1 complex subunit gamma. (829 aa)
	H3C097_TETNG	Clathrin interactor 1a. (638 aa)
	H3C1I9_TETNG	Target of myb1 membrane trafficking protein; Belongs to the TOM1 family. (483 aa)
	H3C2Z4_TETNG	Uncharacterized protein. (350 aa)
	H3C422_TETNG	TEPSIN adaptor related protein complex 4 accessory protein. (448 aa)
	H3DQD1_TETNG	Uncharacterized protein. (234 aa)
	H3DPH3_TETNG	Synaptotagmin Ib. (361 aa)
	H3DLJ7_TETNG	ENTH domain-containing protein. (645 aa)
	H3DLI8_TETNG	Neuronal vesicle trafficking associated 2. (170 aa)
	H3DL76_TETNG	DnaJ (Hsp40) homolog, subfamily C, member 6. (968 aa)
	H3DL38_TETNG	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (235 aa)
	TOM1L2	Target of myb1 like 2 membrane trafficking protein; Belongs to the TOM1 family. (509 aa)
	H3DHP2_TETNG	Low density lipoprotein receptor adaptor protein 1b. (312 aa)
	H3DGQ9_TETNG	Stonin-1; May be involved in the endocytic machinery. (960 aa)
	H3D4E1_TETNG	Synaptotagmin VIa. (487 aa)
	H3D3R0_TETNG	Armadillo repeat containing 9. (554 aa)
	H3D3C6_TETNG	Uncharacterized protein; Belongs to the TOM1 family. (491 aa)
	H3D2N5_TETNG	Synaptotagmin XIb. (459 aa)
	H3D2E7_TETNG	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1683 aa)
	H3D0I8_TETNG	AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...] (437 aa)
	NSG1	Neuronal vesicle trafficking associated 1. (177 aa)
	H3CYK5_TETNG	Epsin 3a. (561 aa)
	H3CVH6_TETNG	Synaptotagmin VIIb. (687 aa)
	H3CV50_TETNG	Low density lipoprotein receptor adaptor protein 1a. (233 aa)
	H3CUB4_TETNG	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (213 aa)
	H3CS33_TETNG	G protein-coupled receptor 108. (523 aa)
	H3CRQ5_TETNG	Epsin 1. (568 aa)
	H3CR83_TETNG	AP-1 complex subunit gamma. (809 aa)
	H3CQT3_TETNG	Synaptotagmin IXb. (341 aa)
	H3CQN8_TETNG	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	H3CQC6_TETNG	AP complex subunit beta. (953 aa)
	H3CN36_TETNG	Synaptosome associated protein 91a. (907 aa)
	H3CMV5_TETNG	Uncharacterized protein. (433 aa)
	H3CMQ8_TETNG	Synaptotagmin XV. (316 aa)
	Q4STK5_TETNG	Chromosome undetermined SCAF14170, whole genome shotgun sequence. (350 aa)
	H3CM05_TETNG	Adaptor related protein complex 4 subunit beta 1. (721 aa)
	H3CL14_TETNG	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (930 aa)
	H3CL09_TETNG	Synaptotagmin III. (478 aa)
	H3CKC5_TETNG	Uncharacterized protein. (147 aa)
	H3CJF6_TETNG	Synaptotagmin XII. (425 aa)
	H3CHT4_TETNG	Uncharacterized protein. (69 aa)
	H3CHT3_TETNG	Clathrin-link domain-containing protein. (1312 aa)
	H3CFW7_TETNG	C2 domain-containing protein. (133 aa)
	Q4TJ41_TETNG	Chromosome undetermined SCAF838, whole genome shotgun sequence. (113 aa)
	H3CFP0_TETNG	ENTH domain-containing protein. (155 aa)
	H3CFH3_TETNG	Uncharacterized protein. (241 aa)
	H3CDF1_TETNG	Si:ch211-200p22.4. (645 aa)
	H3CD15_TETNG	Adaptor related protein complex 2 subunit alpha 1. (852 aa)
	H3CAL7_TETNG	Clathrin_bdg domain-containing protein. (184 aa)
	H3C9W8_TETNG	Synaptotagmin IV. (465 aa)
	H3C7M2_TETNG	Uncharacterized protein. (132 aa)
	H3C6I8_TETNG	Synaptotagmin Va. (415 aa)
	H3C4E8_TETNG	C2 domain-containing protein. (184 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EPN3	H3BX68_TETNG	ENSTNIP00000017097	ENSTNIP00000000581	Epsin 3.	Uncharacterized protein.	0.520
EPN3	H3BZL5_TETNG	ENSTNIP00000017097	ENSTNIP00000001431	Epsin 3.	AP-1 complex subunit gamma.	0.542
EPN3	H3C447_TETNG	ENSTNIP00000017097	ENSTNIP00000003016	Epsin 3.	Synaptosome associated protein 91b.	0.489
EPN3	H3C638_TETNG	ENSTNIP00000017097	ENSTNIP00000003708	Epsin 3.	Uncharacterized protein.	0.548
EPN3	H3C7M2_TETNG	ENSTNIP00000017097	ENSTNIP00000004244	Epsin 3.	Uncharacterized protein.	0.548
EPN3	H3CD15_TETNG	ENSTNIP00000017097	ENSTNIP00000006138	Epsin 3.	Adaptor related protein complex 2 subunit alpha 1.	0.758
EPN3	H3CDF1_TETNG	ENSTNIP00000017097	ENSTNIP00000006274	Epsin 3.	Si:ch211-200p22.4.	0.489
EPN3	H3CFH3_TETNG	ENSTNIP00000017097	ENSTNIP00000006997	Epsin 3.	Uncharacterized protein.	0.548
EPN3	H3CHT3_TETNG	ENSTNIP00000017097	ENSTNIP00000007811	Epsin 3.	Clathrin-link domain-containing protein.	0.548
EPN3	H3CHT4_TETNG	ENSTNIP00000017097	ENSTNIP00000007812	Epsin 3.	Uncharacterized protein.	0.548
EPN3	H3CKC5_TETNG	ENSTNIP00000017097	ENSTNIP00000008704	Epsin 3.	Uncharacterized protein.	0.548
EPN3	H3CL14_TETNG	ENSTNIP00000017097	ENSTNIP00000008943	Epsin 3.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.566
EPN3	H3CM05_TETNG	ENSTNIP00000017097	ENSTNIP00000009285	Epsin 3.	Adaptor related protein complex 4 subunit beta 1.	0.551
EPN3	H3CN36_TETNG	ENSTNIP00000017097	ENSTNIP00000009667	Epsin 3.	Synaptosome associated protein 91a.	0.489
EPN3	H3CQC6_TETNG	ENSTNIP00000017097	ENSTNIP00000010460	Epsin 3.	AP complex subunit beta.	0.601
EPN3	H3CQN8_TETNG	ENSTNIP00000017097	ENSTNIP00000010572	Epsin 3.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.582
EPN3	H3CR83_TETNG	ENSTNIP00000017097	ENSTNIP00000010767	Epsin 3.	AP-1 complex subunit gamma.	0.542
EPN3	H3CUB4_TETNG	ENSTNIP00000017097	ENSTNIP00000011848	Epsin 3.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.704
EPN3	H3D0I8_TETNG	ENSTNIP00000017097	ENSTNIP00000014024	Epsin 3.	AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...]	0.631
EPN3	H3D2E7_TETNG	ENSTNIP00000017097	ENSTNIP00000014685	Epsin 3.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.548