(20 nodes) Rough endoplasmic reticulum membrane network (Tetraodon nigroviridis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3D3Y7_TETNG	EPM2A glucan phosphatase, laforin. (315 aa)
	H3DM01_TETNG	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (97 aa)
	H3DAU5_TETNG	Plug_translocon domain-containing protein. (476 aa)
	H3CY85_TETNG	SRP receptor subunit alpha. (633 aa)
	H3CV49_TETNG	Macoilin 1a. (669 aa)
	Q4SP17_TETNG	Chromosome 15 SCAF14542, whole genome shotgun sequence. (900 aa)
	H3CQK8_TETNG	SRP receptor subunit beta. (261 aa)
	H3CNR7_TETNG	Plug_translocon domain-containing protein. (476 aa)
	H3CL23_TETNG	SUN domain containing ossification factor. (1049 aa)
	PI4KB	Chromosome undetermined SCAF11492, whole genome shotgun sequence; Belongs to the PI3/PI4-kinase family. (818 aa)
	H3CEX8_TETNG	Si:dkey-12h9.6. (635 aa)
	H3CB85_TETNG	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (830 aa)
	H3BXT4_TETNG	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	H3BXR9_TETNG	Si:dkey-206d17.12. (523 aa)
	H3DBT4_TETNG	Coiled-coil domain containing 47. (485 aa)
	H3DFW2_TETNG	SEC63 homolog, protein translocation regulator. (733 aa)
	H3DHP1_TETNG	Macoilin 1b. (676 aa)
	RPS29	Chromosome 14 SCAF14660, whole genome shotgun sequence. (56 aa)
	Q4SBM8_TETNG	Chromosome 15 SCAF14667, whole genome shotgun sequence. (69 aa)
	H3DA66_TETNG	Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins. (185 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3BXT4_TETNG	H3CNR7_TETNG	ENSTNIP00000000797	ENSTNIP00000009900	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	Plug_translocon domain-containing protein.	0.857
H3BXT4_TETNG	H3CQK8_TETNG	ENSTNIP00000000797	ENSTNIP00000010542	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	SRP receptor subunit beta.	0.792
H3BXT4_TETNG	H3CY85_TETNG	ENSTNIP00000000797	ENSTNIP00000013220	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	SRP receptor subunit alpha.	0.792
H3BXT4_TETNG	H3DAU5_TETNG	ENSTNIP00000000797	ENSTNIP00000017637	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	Plug_translocon domain-containing protein.	0.857
H3BXT4_TETNG	H3DBT4_TETNG	ENSTNIP00000000797	ENSTNIP00000017977	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	Coiled-coil domain containing 47.	0.805
H3BXT4_TETNG	H3DM01_TETNG	ENSTNIP00000000797	ENSTNIP00000021549	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.946
H3BXT4_TETNG	Q4SBM8_TETNG	ENSTNIP00000000797	ENSTNIP00000013997	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	Chromosome 15 SCAF14667, whole genome shotgun sequence.	0.998
H3BXT4_TETNG	RPS29	ENSTNIP00000000797	ENSTNIP00000013907	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	Chromosome 14 SCAF14660, whole genome shotgun sequence.	0.998
H3CNR7_TETNG	H3BXT4_TETNG	ENSTNIP00000009900	ENSTNIP00000000797	Plug_translocon domain-containing protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.857
H3CNR7_TETNG	H3CQK8_TETNG	ENSTNIP00000009900	ENSTNIP00000010542	Plug_translocon domain-containing protein.	SRP receptor subunit beta.	0.632
H3CNR7_TETNG	H3CY85_TETNG	ENSTNIP00000009900	ENSTNIP00000013220	Plug_translocon domain-containing protein.	SRP receptor subunit alpha.	0.850
H3CNR7_TETNG	H3DBT4_TETNG	ENSTNIP00000009900	ENSTNIP00000017977	Plug_translocon domain-containing protein.	Coiled-coil domain containing 47.	0.750
H3CNR7_TETNG	H3DFW2_TETNG	ENSTNIP00000009900	ENSTNIP00000019406	Plug_translocon domain-containing protein.	SEC63 homolog, protein translocation regulator.	0.991
H3CNR7_TETNG	H3DM01_TETNG	ENSTNIP00000009900	ENSTNIP00000021549	Plug_translocon domain-containing protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.951
H3CNR7_TETNG	Q4SBM8_TETNG	ENSTNIP00000009900	ENSTNIP00000013997	Plug_translocon domain-containing protein.	Chromosome 15 SCAF14667, whole genome shotgun sequence.	0.535
H3CNR7_TETNG	RPS29	ENSTNIP00000009900	ENSTNIP00000013907	Plug_translocon domain-containing protein.	Chromosome 14 SCAF14660, whole genome shotgun sequence.	0.948
H3CQK8_TETNG	H3BXT4_TETNG	ENSTNIP00000010542	ENSTNIP00000000797	SRP receptor subunit beta.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.792
H3CQK8_TETNG	H3CNR7_TETNG	ENSTNIP00000010542	ENSTNIP00000009900	SRP receptor subunit beta.	Plug_translocon domain-containing protein.	0.632
H3CQK8_TETNG	H3CY85_TETNG	ENSTNIP00000010542	ENSTNIP00000013220	SRP receptor subunit beta.	SRP receptor subunit alpha.	0.992
H3CQK8_TETNG	H3DAU5_TETNG	ENSTNIP00000010542	ENSTNIP00000017637	SRP receptor subunit beta.	Plug_translocon domain-containing protein.	0.632