(51 nodes) Heterochromatin assembly network (Tetraodon nigroviridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Q4TFM1_TETNG	Chromosome undetermined SCAF4380, whole genome shotgun sequence. (111 aa)
	LMNA	Lamin A/C; Belongs to the intermediate filament family. (605 aa)
	H3BYU6_TETNG	SET domain-containing protein. (666 aa)
	H3C119_TETNG	Methyl CpG binding protein 2. (432 aa)
	H3C4X8_TETNG	DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1428 aa)
	H3C5B5_TETNG	SET domain-containing protein. (134 aa)
	H3C664_TETNG	Helicase, lymphoid specific. (867 aa)
	H3C7G6_TETNG	PRC2_HTH_1 domain-containing protein. (312 aa)
	H3C7K1_TETNG	Uncharacterized protein. (110 aa)
	Q4THZ3_TETNG	Chromosome undetermined SCAF2527, whole genome shotgun sequence. (103 aa)
	Q4TFL9_TETNG	Chromosome undetermined SCAF4381, whole genome shotgun sequence. (199 aa)
	H3C8M3_TETNG	PHD-type domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (282 aa)
	H3C8R8_TETNG	PRC2_HTH_1 domain-containing protein. (340 aa)
	H3C8Y8_TETNG	PRC2_HTH_1 domain-containing protein. (212 aa)
	Q4TEI3_TETNG	Chromosome undetermined SCAF5358, whole genome shotgun sequence. (242 aa)
	H3CBS3_TETNG	Lamin B1; Belongs to the intermediate filament family. (586 aa)
	H3CCL4_TETNG	Uncharacterized protein; Belongs to the intermediate filament family. (564 aa)
	H3CCQ5_TETNG	Polymerase (DNA directed), epsilon 3 (p17 subunit). (134 aa)
	H3DBA5_TETNG	Uncharacterized protein. (117 aa)
	H3DCZ4_TETNG	Uncharacterized protein. (244 aa)
	H3DD00_TETNG	Sirtuin 6. (304 aa)
	H3DET6_TETNG	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1344 aa)
	H3DFP4_TETNG	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (125 aa)
	H3DFP5_TETNG	Uncharacterized protein. (116 aa)
	H3DHR2_TETNG	Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. (419 aa)
	Q4RM61_TETNG	Chromosome 10 SCAF15019, whole genome shotgun sequence. (708 aa)
	H3DQG8_TETNG	DMAP-interaction domain-containing protein. (67 aa)
	ENSTNIP00000022847	Unnamed protein product. (66 aa)
	H3DQW4_TETNG	PRC2_HTH_1 domain-containing protein. (182 aa)
	H3CD86_TETNG	Nurim. (268 aa)
	H3CDI5_TETNG	MBD domain-containing protein. (265 aa)
	H3CEU8_TETNG	PRC2_HTH_1 domain-containing protein. (354 aa)
	H3CF02_TETNG	PRC2_HTH_1 domain-containing protein. (352 aa)
	H3CFG2_TETNG	Histone-lysine N-methyltransferase, H3 lysine-79 specific. (1185 aa)
	H3CFU2_TETNG	Uncharacterized protein; Belongs to the intermediate filament family. (609 aa)
	Q4T110_TETNG	Chromosome undetermined SCAF10758, whole genome shotgun sequence. (139 aa)
	H3CIQ2_TETNG	Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. (1917 aa)
	Q4TJ10_TETNG	Chromosome undetermined SCAF1131, whole genome shotgun sequence. (64 aa)
	H3CL42_TETNG	PRC2_HTH_1 domain-containing protein. (235 aa)
	H3CNN6_TETNG	Zinc finger, NFX1-type containing 1. (1755 aa)
	H3CNV9_TETNG	Lamin B2; Belongs to the intermediate filament family. (580 aa)
	H3CX09_TETNG	Family with sequence similarity 172 member A. (332 aa)
	H3CYN2_TETNG	SPT2 chromatin protein domain containing 1. (652 aa)
	H3CZ55_TETNG	Methyl-CpG binding domain protein 3a. (274 aa)
	Q4SCX8_TETNG	Chromosome 14 SCAF14646, whole genome shotgun sequence. (871 aa)
	H3CZK1_TETNG	Protein phosphatase, Mg2+/Mn2+ dependent, 1Db. (422 aa)
	H3D1V0_TETNG	Replication timing regulatory factor 1. (2294 aa)
	EZH1	Enhancer of zeste 1 polycomb repressive complex 2 subunit. (738 aa)
	H3D2K0_TETNG	Retinoblastoma 1. (917 aa)
	H3D6D6_TETNG	Deacetylase sirtuin-type domain-containing protein. (537 aa)
	H3DA68_TETNG	Protein phosphatase, Mg2+/Mn2+ dependent, 1Da. (424 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTNIP00000022847	H3CFU2_TETNG	ENSTNIP00000022847	ENSTNIP00000007119	Unnamed protein product.	Uncharacterized protein; Belongs to the intermediate filament family.	0.922
EZH1	H3DET6_TETNG	ENSTNIP00000014645	ENSTNIP00000019029	Enhancer of zeste 1 polycomb repressive complex 2 subunit.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.482
EZH1	H3DQG8_TETNG	ENSTNIP00000014645	ENSTNIP00000022767	Enhancer of zeste 1 polycomb repressive complex 2 subunit.	DMAP-interaction domain-containing protein.	0.482
H3BYU6_TETNG	H3DET6_TETNG	ENSTNIP00000001162	ENSTNIP00000019029	SET domain-containing protein.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.482
H3BYU6_TETNG	H3DQG8_TETNG	ENSTNIP00000001162	ENSTNIP00000022767	SET domain-containing protein.	DMAP-interaction domain-containing protein.	0.482
H3C119_TETNG	H3C4X8_TETNG	ENSTNIP00000001935	ENSTNIP00000003297	Methyl CpG binding protein 2.	DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.528
H3C119_TETNG	H3C8M3_TETNG	ENSTNIP00000001935	ENSTNIP00000004595	Methyl CpG binding protein 2.	PHD-type domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.528
H3C119_TETNG	H3CZ55_TETNG	ENSTNIP00000001935	ENSTNIP00000013540	Methyl CpG binding protein 2.	Methyl-CpG binding domain protein 3a.	0.594
H3C119_TETNG	H3DET6_TETNG	ENSTNIP00000001935	ENSTNIP00000019029	Methyl CpG binding protein 2.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.589
H3C119_TETNG	H3DQG8_TETNG	ENSTNIP00000001935	ENSTNIP00000022767	Methyl CpG binding protein 2.	DMAP-interaction domain-containing protein.	0.589
H3C4X8_TETNG	H3C119_TETNG	ENSTNIP00000003297	ENSTNIP00000001935	DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Methyl CpG binding protein 2.	0.528
H3C4X8_TETNG	H3DET6_TETNG	ENSTNIP00000003297	ENSTNIP00000019029	DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.690
H3C4X8_TETNG	H3DQG8_TETNG	ENSTNIP00000003297	ENSTNIP00000022767	DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	DMAP-interaction domain-containing protein.	0.690
H3C5B5_TETNG	H3C7G6_TETNG	ENSTNIP00000003434	ENSTNIP00000004188	SET domain-containing protein.	PRC2_HTH_1 domain-containing protein.	0.827
H3C5B5_TETNG	H3C8R8_TETNG	ENSTNIP00000003434	ENSTNIP00000004640	SET domain-containing protein.	PRC2_HTH_1 domain-containing protein.	0.798
H3C5B5_TETNG	H3C8Y8_TETNG	ENSTNIP00000003434	ENSTNIP00000004710	SET domain-containing protein.	PRC2_HTH_1 domain-containing protein.	0.898
H3C5B5_TETNG	H3CEU8_TETNG	ENSTNIP00000003434	ENSTNIP00000006772	SET domain-containing protein.	PRC2_HTH_1 domain-containing protein.	0.892
H3C5B5_TETNG	H3CF02_TETNG	ENSTNIP00000003434	ENSTNIP00000006826	SET domain-containing protein.	PRC2_HTH_1 domain-containing protein.	0.896
H3C5B5_TETNG	H3CL42_TETNG	ENSTNIP00000003434	ENSTNIP00000008971	SET domain-containing protein.	PRC2_HTH_1 domain-containing protein.	0.869
H3C5B5_TETNG	H3DET6_TETNG	ENSTNIP00000003434	ENSTNIP00000019029	SET domain-containing protein.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.482