STRINGSTRING
H3C699_TETNG H3C699_TETNG H3C768_TETNG H3C768_TETNG H3CBD8_TETNG H3CBD8_TETNG Q4T891_TETNG Q4T891_TETNG Q4T029_TETNG Q4T029_TETNG H3D2E9_TETNG H3D2E9_TETNG H3CWZ8_TETNG H3CWZ8_TETNG H3CQA6_TETNG H3CQA6_TETNG Q4SQY6_TETNG Q4SQY6_TETNG H3CP56_TETNG H3CP56_TETNG H3D9V5_TETNG H3D9V5_TETNG H3DHJ6_TETNG H3DHJ6_TETNG Q4RE31_TETNG Q4RE31_TETNG H3D557_TETNG H3D557_TETNG H3C5Q3_TETNG H3C5Q3_TETNG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H3C699_TETNGGem (nuclear organelle) associated protein 6. (175 aa)
H3C768_TETNGSmall nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (104 aa)
H3CBD8_TETNGSmall nuclear ribonucleoprotein-associated protein. (238 aa)
Q4T891_TETNGSmall nuclear ribonucleoprotein G. (76 aa)
Q4T029_TETNGSmall nuclear ribonucleoprotein Sm D3. (127 aa)
H3D2E9_TETNGSmall nuclear ribonucleoprotein Sm D2. (109 aa)
H3CWZ8_TETNGSurvival of motor neuron 1, telomeric. (285 aa)
H3CQA6_TETNGGem (nuclear organelle) associated protein 5. (1473 aa)
Q4SQY6_TETNGSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
H3CP56_TETNGSerine/threonine kinase receptor associated protein. (320 aa)
H3D9V5_TETNGGem (nuclear organelle) associated protein 4. (1054 aa)
H3DHJ6_TETNGGem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (265 aa)
Q4RE31_TETNGChromosome 9 SCAF15140, whole genome shotgun sequence; Belongs to the DEAD box helicase family. (761 aa)
H3D557_TETNGSmall nuclear ribonucleoprotein polypeptide F. (86 aa)
H3C5Q3_TETNGGem (nuclear organelle) associated protein 8. (198 aa)
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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