(13 nodes) Proteasome assembly network (Tetraodon nigroviridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3BVR6_TETNG	Proteasome (prosome, macropain) assembly chaperone 3. (123 aa)
	H3C3F8_TETNG	Proteasome 26S subunit, non-ATPase 10. (226 aa)
	H3CEP2_TETNG	Ecm29 proteasome adaptor and scaffold. (1817 aa)
	Q4T5E9_TETNG	Chromosome undetermined SCAF9291, whole genome shotgun sequence. (134 aa)
	H3CKM6_TETNG	Proteasome 26S subunit, non-ATPase 11b. (422 aa)
	H3CQD2_TETNG	Uncharacterized protein. (280 aa)
	H3CTM9_TETNG	Proteasome maturation protein. (99 aa)
	Q4SJ40_TETNG	Chromosome 21 SCAF14577, whole genome shotgun sequence. (264 aa)
	Q4RKH0_TETNG	Chromosome 21 SCAF15029, whole genome shotgun sequence. (70 aa)
	H3DEG0_TETNG	Proteasome 26S subunit, non-ATPase 9. (216 aa)
	PSMD11	PCI domain-containing protein. (422 aa)
	ADRM1	Adhesion regulating molecule 1. (386 aa)
	H3DN33_TETNG	Proteasome 26S subunit, non-ATPase 5. (504 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADRM1	H3C3F8_TETNG	ENSTNIP00000015452	ENSTNIP00000002777	Adhesion regulating molecule 1.	Proteasome 26S subunit, non-ATPase 10.	0.966
ADRM1	H3CEP2_TETNG	ENSTNIP00000015452	ENSTNIP00000006716	Adhesion regulating molecule 1.	Ecm29 proteasome adaptor and scaffold.	0.924
ADRM1	H3CKM6_TETNG	ENSTNIP00000015452	ENSTNIP00000008805	Adhesion regulating molecule 1.	Proteasome 26S subunit, non-ATPase 11b.	0.966
ADRM1	H3CTM9_TETNG	ENSTNIP00000015452	ENSTNIP00000011613	Adhesion regulating molecule 1.	Proteasome maturation protein.	0.562
ADRM1	H3DEG0_TETNG	ENSTNIP00000015452	ENSTNIP00000018903	Adhesion regulating molecule 1.	Proteasome 26S subunit, non-ATPase 9.	0.951
ADRM1	H3DN33_TETNG	ENSTNIP00000015452	ENSTNIP00000021931	Adhesion regulating molecule 1.	Proteasome 26S subunit, non-ATPase 5.	0.989
ADRM1	PSMD11	ENSTNIP00000015452	ENSTNIP00000014099	Adhesion regulating molecule 1.	PCI domain-containing protein.	0.966
ADRM1	Q4RKH0_TETNG	ENSTNIP00000015452	ENSTNIP00000020914	Adhesion regulating molecule 1.	Chromosome 21 SCAF15029, whole genome shotgun sequence.	0.942
ADRM1	Q4T5E9_TETNG	ENSTNIP00000015452	ENSTNIP00000006753	Adhesion regulating molecule 1.	Chromosome undetermined SCAF9291, whole genome shotgun sequence.	0.966
H3BVR6_TETNG	H3CQD2_TETNG	ENSTNIP00000000078	ENSTNIP00000010466	Proteasome (prosome, macropain) assembly chaperone 3.	Uncharacterized protein.	0.537
H3BVR6_TETNG	H3CTM9_TETNG	ENSTNIP00000000078	ENSTNIP00000011613	Proteasome (prosome, macropain) assembly chaperone 3.	Proteasome maturation protein.	0.624
H3BVR6_TETNG	Q4SJ40_TETNG	ENSTNIP00000000078	ENSTNIP00000012008	Proteasome (prosome, macropain) assembly chaperone 3.	Chromosome 21 SCAF14577, whole genome shotgun sequence.	0.925
H3C3F8_TETNG	ADRM1	ENSTNIP00000002777	ENSTNIP00000015452	Proteasome 26S subunit, non-ATPase 10.	Adhesion regulating molecule 1.	0.966
H3C3F8_TETNG	H3CEP2_TETNG	ENSTNIP00000002777	ENSTNIP00000006716	Proteasome 26S subunit, non-ATPase 10.	Ecm29 proteasome adaptor and scaffold.	0.577
H3C3F8_TETNG	H3CKM6_TETNG	ENSTNIP00000002777	ENSTNIP00000008805	Proteasome 26S subunit, non-ATPase 10.	Proteasome 26S subunit, non-ATPase 11b.	0.908
H3C3F8_TETNG	H3CTM9_TETNG	ENSTNIP00000002777	ENSTNIP00000011613	Proteasome 26S subunit, non-ATPase 10.	Proteasome maturation protein.	0.561
H3C3F8_TETNG	H3DEG0_TETNG	ENSTNIP00000002777	ENSTNIP00000018903	Proteasome 26S subunit, non-ATPase 10.	Proteasome 26S subunit, non-ATPase 9.	0.929
H3C3F8_TETNG	H3DN33_TETNG	ENSTNIP00000002777	ENSTNIP00000021931	Proteasome 26S subunit, non-ATPase 10.	Proteasome 26S subunit, non-ATPase 5.	0.715
H3C3F8_TETNG	PSMD11	ENSTNIP00000002777	ENSTNIP00000014099	Proteasome 26S subunit, non-ATPase 10.	PCI domain-containing protein.	0.908
H3C3F8_TETNG	Q4RKH0_TETNG	ENSTNIP00000002777	ENSTNIP00000020914	Proteasome 26S subunit, non-ATPase 10.	Chromosome 21 SCAF15029, whole genome shotgun sequence.	0.628