(10 nodes) Neuromuscular process controlling posture network (Tetraodon nigroviridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3CSV2_TETNG	Gastrulation brain homeobox 1. (320 aa)
	Q4RGI4_TETNG	Chromosome undetermined SCAF15099, whole genome shotgun sequence. (217 aa)
	H3D086_TETNG	PNKD metallo-beta-lactamase domain containing. (358 aa)
	H3CXW2_TETNG	GTP_cyclohydroI domain-containing protein. (174 aa)
	H3BWX6_TETNG	GTP_cyclohydroI domain-containing protein. (164 aa)
	H3C119_TETNG	Methyl CpG binding protein 2. (432 aa)
	H3CD74_TETNG	GTP cyclohydrolase 2. (244 aa)
	H3CF94_TETNG	Uncharacterized protein. (213 aa)
	H3CLZ3_TETNG	Uncharacterized protein. (174 aa)
	Q4SNX2_TETNG	Chromosome 15 SCAF14542, whole genome shotgun sequence. (136 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3CD74_TETNG	H3CXW2_TETNG	ENSTNIP00000006197	ENSTNIP00000013097	GTP cyclohydrolase 2.	GTP_cyclohydroI domain-containing protein.	0.902
H3CD74_TETNG	Q4RGI4_TETNG	ENSTNIP00000006197	ENSTNIP00000021985	GTP cyclohydrolase 2.	Chromosome undetermined SCAF15099, whole genome shotgun sequence.	0.901
H3CXW2_TETNG	H3CD74_TETNG	ENSTNIP00000013097	ENSTNIP00000006197	GTP_cyclohydroI domain-containing protein.	GTP cyclohydrolase 2.	0.902
H3CXW2_TETNG	Q4RGI4_TETNG	ENSTNIP00000013097	ENSTNIP00000021985	GTP_cyclohydroI domain-containing protein.	Chromosome undetermined SCAF15099, whole genome shotgun sequence.	0.902
Q4RGI4_TETNG	H3CD74_TETNG	ENSTNIP00000021985	ENSTNIP00000006197	Chromosome undetermined SCAF15099, whole genome shotgun sequence.	GTP cyclohydrolase 2.	0.901
Q4RGI4_TETNG	H3CXW2_TETNG	ENSTNIP00000021985	ENSTNIP00000013097	Chromosome undetermined SCAF15099, whole genome shotgun sequence.	GTP_cyclohydroI domain-containing protein.	0.902