STRINGSTRING
H3CXL1_TETNG H3CXL1_TETNG H3D308_TETNG H3D308_TETNG H3DGD4_TETNG H3DGD4_TETNG SP3 SP3 H3BVZ1_TETNG H3BVZ1_TETNG H3C5Q5_TETNG H3C5Q5_TETNG SUMO1-2 SUMO1-2 H3CKU9_TETNG H3CKU9_TETNG H3DBI5_TETNG H3DBI5_TETNG H3D7D5_TETNG H3D7D5_TETNG H3D662_TETNG H3D662_TETNG SUMO1 SUMO1 H3DIK1_TETNG H3DIK1_TETNG H3DIK7_TETNG H3DIK7_TETNG H3CL87_TETNG H3CL87_TETNG Q4SV04_TETNG Q4SV04_TETNG H3CRQ7_TETNG H3CRQ7_TETNG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H3CXL1_TETNGCDK5 regulatory subunit associated protein 3. (505 aa)
H3D308_TETNGSmall ubiquitin-related modifier. (96 aa)
H3DGD4_TETNGSmall ubiquitin-related modifier. (95 aa)
SP3Sp3a transcription factor. (643 aa)
H3BVZ1_TETNGT-cell acute lymphocytic leukemia 1. (370 aa)
H3C5Q5_TETNGAdenosine deaminase RNA specific. (1195 aa)
SUMO1-2Small ubiquitin-related modifier. (101 aa)
H3CKU9_TETNGBHLH domain-containing protein. (331 aa)
H3DBI5_TETNGMindbomb E3 ubiquitin protein ligase 1. (1008 aa)
H3D7D5_TETNGSUMO1 activating enzyme subunit 1. (342 aa)
H3D662_TETNGH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (176 aa)
SUMO1Small ubiquitin like modifier 1. (101 aa)
H3DIK1_TETNGSp3b transcription factor. (627 aa)
H3DIK7_TETNGSmall ubiquitin-related modifier. (94 aa)
H3CL87_TETNGKRI1 homolog. (311 aa)
Q4SV04_TETNGChromosome undetermined SCAF13832, whole genome shotgun sequence; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
H3CRQ7_TETNGMicrofibril associated protein 5. (128 aa)
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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