STRINGSTRING
H3BXT4_TETNG H3BXT4_TETNG H3D3Y7_TETNG H3D3Y7_TETNG Q4SBM8_TETNG Q4SBM8_TETNG RPS29 RPS29
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H3BXT4_TETNG60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
H3D3Y7_TETNGEPM2A glucan phosphatase, laforin. (315 aa)
Q4SBM8_TETNGChromosome 15 SCAF14667, whole genome shotgun sequence. (69 aa)
RPS29Chromosome 14 SCAF14660, whole genome shotgun sequence. (56 aa)
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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