(4 nodes) Clathrin-dependent synaptic vesicle endocytosis network (Tetraodon nigroviridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3C102_TETNG	Intersectin 1 (SH3 domain protein). (1664 aa)
	H3DFV8_TETNG	Intersectin 2a. (1637 aa)
	H3D8C3_TETNG	Si:ch73-389b16.2. (1587 aa)
	H3DK01_TETNG	Uncharacterized protein. (1626 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3C102_TETNG	H3DFV8_TETNG	ENSTNIP00000001918	ENSTNIP00000019402	Intersectin 1 (SH3 domain protein).	Intersectin 2a.	0.925
H3C102_TETNG	H3DK01_TETNG	ENSTNIP00000001918	ENSTNIP00000020847	Intersectin 1 (SH3 domain protein).	Uncharacterized protein.	0.925
H3DFV8_TETNG	H3C102_TETNG	ENSTNIP00000019402	ENSTNIP00000001918	Intersectin 2a.	Intersectin 1 (SH3 domain protein).	0.925
H3DFV8_TETNG	H3DK01_TETNG	ENSTNIP00000019402	ENSTNIP00000020847	Intersectin 2a.	Uncharacterized protein.	0.935
H3DK01_TETNG	H3C102_TETNG	ENSTNIP00000020847	ENSTNIP00000001918	Uncharacterized protein.	Intersectin 1 (SH3 domain protein).	0.925
H3DK01_TETNG	H3DFV8_TETNG	ENSTNIP00000020847	ENSTNIP00000019402	Uncharacterized protein.	Intersectin 2a.	0.935