11 items (Tetraodon nigroviridis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3CKA1_TETNG	Uncharacterized protein. (301 aa)
	H3C2Z2_TETNG	LAM_G_DOMAIN domain-containing protein. (131 aa)
	H3C7N0_TETNG	Uncharacterized protein. (255 aa)
	H3CDM0_TETNG	Laminin, alpha 5. (1378 aa)
	H3CHZ2_TETNG	Laminin N-terminal domain-containing protein. (155 aa)
	LAMA3	Laminin subunit alpha 3. (3451 aa)
	H3BW16_TETNG	Uncharacterized protein. (147 aa)
	H3DG70_TETNG	Uncharacterized protein. (2981 aa)
	H3DJT5_TETNG	Laminin, alpha 3. (1646 aa)
	H3DKD8_TETNG	Uncharacterized protein. (116 aa)
	H3CI65_TETNG	Laminin, alpha 4. (1263 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3BW16_TETNG	H3CHZ2_TETNG	ENSTNIP00000000178	ENSTNIP00000007870	Uncharacterized protein.	Laminin N-terminal domain-containing protein.	0.537
H3BW16_TETNG	H3CI65_TETNG	ENSTNIP00000000178	ENSTNIP00000007943	Uncharacterized protein.	Laminin, alpha 4.	0.913
H3C2Z2_TETNG	H3CKA1_TETNG	ENSTNIP00000002610	ENSTNIP00000008680	LAM_G_DOMAIN domain-containing protein.	Uncharacterized protein.	0.609
H3CDM0_TETNG	H3CHZ2_TETNG	ENSTNIP00000006343	ENSTNIP00000007870	Laminin, alpha 5.	Laminin N-terminal domain-containing protein.	0.520
H3CDM0_TETNG	H3CKA1_TETNG	ENSTNIP00000006343	ENSTNIP00000008680	Laminin, alpha 5.	Uncharacterized protein.	0.890
H3CDM0_TETNG	H3DJT5_TETNG	ENSTNIP00000006343	ENSTNIP00000020781	Laminin, alpha 5.	Laminin, alpha 3.	0.565
H3CHZ2_TETNG	H3BW16_TETNG	ENSTNIP00000007870	ENSTNIP00000000178	Laminin N-terminal domain-containing protein.	Uncharacterized protein.	0.537
H3CHZ2_TETNG	H3CDM0_TETNG	ENSTNIP00000007870	ENSTNIP00000006343	Laminin N-terminal domain-containing protein.	Laminin, alpha 5.	0.520
H3CHZ2_TETNG	H3DJT5_TETNG	ENSTNIP00000007870	ENSTNIP00000020781	Laminin N-terminal domain-containing protein.	Laminin, alpha 3.	0.458
H3CI65_TETNG	H3BW16_TETNG	ENSTNIP00000007943	ENSTNIP00000000178	Laminin, alpha 4.	Uncharacterized protein.	0.913
H3CKA1_TETNG	H3C2Z2_TETNG	ENSTNIP00000008680	ENSTNIP00000002610	Uncharacterized protein.	LAM_G_DOMAIN domain-containing protein.	0.609
H3CKA1_TETNG	H3CDM0_TETNG	ENSTNIP00000008680	ENSTNIP00000006343	Uncharacterized protein.	Laminin, alpha 5.	0.890
H3CKA1_TETNG	H3DKD8_TETNG	ENSTNIP00000008680	ENSTNIP00000020984	Uncharacterized protein.	Uncharacterized protein.	0.487
H3DJT5_TETNG	H3CDM0_TETNG	ENSTNIP00000020781	ENSTNIP00000006343	Laminin, alpha 3.	Laminin, alpha 5.	0.565
H3DJT5_TETNG	H3CHZ2_TETNG	ENSTNIP00000020781	ENSTNIP00000007870	Laminin, alpha 3.	Laminin N-terminal domain-containing protein.	0.458
H3DKD8_TETNG	H3CKA1_TETNG	ENSTNIP00000020984	ENSTNIP00000008680	Uncharacterized protein.	Uncharacterized protein.	0.487