(20 nodes) Zinc finger, ZZ-type network (Tetraodon nigroviridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3CZY9_TETNG	Mindbomb E3 ubiquitin protein ligase 2. (996 aa)
	H3DPP2_TETNG	Dystrobrevin. (615 aa)
	H3DK30_TETNG	Transcriptional adaptor 2B. (226 aa)
	H3DHH3_TETNG	Dystrophin related protein 2. (886 aa)
	H3DFM6_TETNG	Transcriptional adapter. (445 aa)
	H3D3Y8_TETNG	Utrophin; May play a role in anchoring the cytoskeleton to the plasma membrane. (3158 aa)
	H3CZ82_TETNG	HECT and RLD domain containing E3 ubiquitin protein ligase 2. (4808 aa)
	H3CSZ8_TETNG	Zinc finger, ZZ-type with EF hand domain 1. (2932 aa)
	H3CSW5_TETNG	Dystrobrevin. (678 aa)
	H3CQ27_TETNG	Potassium channel modulatory factor 1. (189 aa)
	H3CNJ7_TETNG	CREB binding protein b. (2156 aa)
	H3CLM3_TETNG	Uncharacterized protein. (242 aa)
	H3CL95_TETNG	E1A binding protein p300 b. (2301 aa)
	H3CBI4_TETNG	Sequestosome 1. (421 aa)
	H3C7H8_TETNG	ZZ-type domain-containing protein. (230 aa)
	H3D5Y4_TETNG	E1A binding protein p300 a. (2336 aa)
	H3D6Y7_TETNG	Dystrophin. (637 aa)
	H3D9B5_TETNG	CREB binding protein a. (2251 aa)
	H3DBI5_TETNG	Mindbomb E3 ubiquitin protein ligase 1. (1008 aa)
	H3DEU0_TETNG	Uncharacterized protein. (390 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3CL95_TETNG	H3CNJ7_TETNG	ENSTNIP00000009024	ENSTNIP00000009829	E1A binding protein p300 b.	CREB binding protein b.	0.930
H3CL95_TETNG	H3D9B5_TETNG	ENSTNIP00000009024	ENSTNIP00000017106	E1A binding protein p300 b.	CREB binding protein a.	0.932
H3CLM3_TETNG	H3DFM6_TETNG	ENSTNIP00000009152	ENSTNIP00000019320	Uncharacterized protein.	Transcriptional adapter.	0.947
H3CLM3_TETNG	H3DK30_TETNG	ENSTNIP00000009152	ENSTNIP00000020876	Uncharacterized protein.	Transcriptional adaptor 2B.	0.511
H3CNJ7_TETNG	H3CL95_TETNG	ENSTNIP00000009829	ENSTNIP00000009024	CREB binding protein b.	E1A binding protein p300 b.	0.930
H3CNJ7_TETNG	H3D5Y4_TETNG	ENSTNIP00000009829	ENSTNIP00000015924	CREB binding protein b.	E1A binding protein p300 a.	0.930
H3D5Y4_TETNG	H3CNJ7_TETNG	ENSTNIP00000015924	ENSTNIP00000009829	E1A binding protein p300 a.	CREB binding protein b.	0.930
H3D5Y4_TETNG	H3D9B5_TETNG	ENSTNIP00000015924	ENSTNIP00000017106	E1A binding protein p300 a.	CREB binding protein a.	0.932
H3D9B5_TETNG	H3CL95_TETNG	ENSTNIP00000017106	ENSTNIP00000009024	CREB binding protein a.	E1A binding protein p300 b.	0.932
H3D9B5_TETNG	H3D5Y4_TETNG	ENSTNIP00000017106	ENSTNIP00000015924	CREB binding protein a.	E1A binding protein p300 a.	0.932
H3DFM6_TETNG	H3CLM3_TETNG	ENSTNIP00000019320	ENSTNIP00000009152	Transcriptional adapter.	Uncharacterized protein.	0.947
H3DK30_TETNG	H3CLM3_TETNG	ENSTNIP00000020876	ENSTNIP00000009152	Transcriptional adaptor 2B.	Uncharacterized protein.	0.511