STRINGSTRING
CSDE1 CSDE1 H3D084_TETNG H3D084_TETNG Q4TIP3_TETNG Q4TIP3_TETNG H3DQ59_TETNG H3DQ59_TETNG H3DPC1_TETNG H3DPC1_TETNG Q4RFP0_TETNG Q4RFP0_TETNG H3DNK8_TETNG H3DNK8_TETNG H3DMM4_TETNG H3DMM4_TETNG H3DLC8_TETNG H3DLC8_TETNG H3DKZ5_TETNG H3DKZ5_TETNG H3DJY6_TETNG H3DJY6_TETNG H3DJD9_TETNG H3DJD9_TETNG H3DI20_TETNG H3DI20_TETNG H3DHV9_TETNG H3DHV9_TETNG H3DG63_TETNG H3DG63_TETNG H3DFJ8_TETNG H3DFJ8_TETNG RPA1 RPA1 H3DFF4_TETNG H3DFF4_TETNG H3DFB8_TETNG H3DFB8_TETNG MCM7 MCM7 H3D9I1_TETNG H3D9I1_TETNG H3D996_TETNG H3D996_TETNG H3D7C8_TETNG H3D7C8_TETNG H3D776_TETNG H3D776_TETNG H3D5X7_TETNG H3D5X7_TETNG H3D5U1_TETNG H3D5U1_TETNG H3D432_TETNG H3D432_TETNG Q4S739_TETNG Q4S739_TETNG Q4S7A1_TETNG Q4S7A1_TETNG H3D3G1_TETNG H3D3G1_TETNG Q4S824_TETNG Q4S824_TETNG H3D293_TETNG H3D293_TETNG H3D0Q2_TETNG H3D0Q2_TETNG Q4SBM8_TETNG Q4SBM8_TETNG H3BYY9_TETNG H3BYY9_TETNG H3BZA6_TETNG H3BZA6_TETNG H3C0I6_TETNG H3C0I6_TETNG H3C2G7_TETNG H3C2G7_TETNG H3C4L6_TETNG H3C4L6_TETNG H3C701_TETNG H3C701_TETNG H3C8I7_TETNG H3C8I7_TETNG NARS1 NARS1 H3C921_TETNG H3C921_TETNG H3C922_TETNG H3C922_TETNG H3C9J8_TETNG H3C9J8_TETNG Q4TBZ1_TETNG Q4TBZ1_TETNG H3CAR0_TETNG H3CAR0_TETNG H3CBR9_TETNG H3CBR9_TETNG H3CCB5_TETNG H3CCB5_TETNG H3CD80_TETNG H3CD80_TETNG Q4SZY2_TETNG Q4SZY2_TETNG Q4T2Y2_TETNG Q4T2Y2_TETNG H3CGD4_TETNG H3CGD4_TETNG H3CGP2_TETNG H3CGP2_TETNG H3CH25_TETNG H3CH25_TETNG MRPS12 MRPS12 H3CH92_TETNG H3CH92_TETNG H3CH93_TETNG H3CH93_TETNG H3CI49_TETNG H3CI49_TETNG H3CI86_TETNG H3CI86_TETNG H3CL83_TETNG H3CL83_TETNG H3CLJ2_TETNG H3CLJ2_TETNG H3CMF9_TETNG H3CMF9_TETNG H3CN65_TETNG H3CN65_TETNG H3CP75_TETNG H3CP75_TETNG PNPT1 PNPT1 SRBD1 SRBD1 H3CPY0_TETNG H3CPY0_TETNG dis3l2 dis3l2 H3CR41_TETNG H3CR41_TETNG H3CSW2_TETNG H3CSW2_TETNG H3CTD1_TETNG H3CTD1_TETNG H3CTZ6_TETNG H3CTZ6_TETNG Q4SJH9_TETNG Q4SJH9_TETNG H3CV18_TETNG H3CV18_TETNG H3CVD5_TETNG H3CVD5_TETNG Q4SGW6_TETNG Q4SGW6_TETNG H3CWQ6_TETNG H3CWQ6_TETNG H3CWV5_TETNG H3CWV5_TETNG YBX2 YBX2 EIF5AL1 EIF5AL1 H3CYB9_TETNG H3CYB9_TETNG H3CYH8_TETNG H3CYH8_TETNG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CSDE1Cold shock domain containing E1, RNA-binding. (261 aa)
H3D084_TETNGAspartyl-tRNA synthetase. (530 aa)
Q4TIP3_TETNGChromosome undetermined SCAF1909, whole genome shotgun sequence. (119 aa)
H3DQ59_TETNGPolymerase (RNA) II (DNA directed) polypeptide G-like. (61 aa)
H3DPC1_TETNGDNA helicase; Belongs to the MCM family. (802 aa)
Q4RFP0_TETNGChromosome 16 SCAF15113, whole genome shotgun sequence. (474 aa)
H3DNK8_TETNGProteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (414 aa)
H3DMM4_TETNGRecQ mediated genome instability 2. (147 aa)
H3DLC8_TETNGReplication protein A3. (122 aa)
H3DKZ5_TETNGAminoacyl tRNA synthetase complex interacting multifunctional protein 1a. (317 aa)
H3DJY6_TETNGProteasome 26S subunit, ATPase 3. (446 aa)
H3DJD9_TETNGDNA helicase; Belongs to the MCM family. (899 aa)
H3DI20_TETNGDIS3 exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (947 aa)
H3DHV9_TETNGZinc finger, CCHC domain containing 17. (235 aa)
H3DG63_TETNGPolynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (600 aa)
H3DFJ8_TETNGReplication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (613 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (603 aa)
H3DFF4_TETNGTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1715 aa)
H3DFB8_TETNGMitochondrial ribosomal protein S17. (148 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (728 aa)
H3D9I1_TETNGCST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (368 aa)
H3D996_TETNGExosome component 1. (198 aa)
H3D7C8_TETNGMitochondrial ribosomal protein L2. (291 aa)
H3D776_TETNGUncharacterized protein. (246 aa)
H3D5X7_TETNGCold shock domain containing C2, RNA binding a. (158 aa)
H3D5U1_TETNGMethionine sulfoxide reductase B1b. (469 aa)
H3D432_TETNGLin-28 homolog B (C. elegans). (230 aa)
Q4S739_TETNGEukaryotic translation initiation factor 2, subunit 1 alpha b. (315 aa)
Q4S7A1_TETNGChromosome 1 SCAF14716, whole genome shotgun sequence. (150 aa)
H3D3G1_TETNGProgrammed cell death 11. (1858 aa)
Q4S824_TETNGChromosome 9 SCAF14710, whole genome shotgun sequence. (298 aa)
H3D293_TETNGRibosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (162 aa)
H3D0Q2_TETNGCalcium regulated heat stable protein 1. (152 aa)
Q4SBM8_TETNGChromosome 15 SCAF14667, whole genome shotgun sequence. (69 aa)
H3BYY9_TETNGUncharacterized protein. (817 aa)
H3BZA6_TETNGDNA ligase. (919 aa)
H3C0I6_TETNGRPA_C domain-containing protein. (259 aa)
H3C2G7_TETNGTower domain-containing protein. (941 aa)
H3C4L6_TETNGProteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (448 aa)
H3C701_TETNGEukaryotic translation initiation factor 1A domain containing. (167 aa)
H3C8I7_TETNGtRNA-binding domain-containing protein. (220 aa)
NARS1Asparaginyl-tRNA synthetase. (484 aa)
H3C921_TETNGAA_TRNA_LIGASE_II domain-containing protein. (457 aa)
H3C922_TETNGOB domain-containing protein. (139 aa)
H3C9J8_TETNGRibosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
Q4TBZ1_TETNGEukaryotic translation initiation factor 5A. (156 aa)
H3CAR0_TETNGDEAH (Asp-Glu-Ala-His) box polypeptide 8. (1197 aa)
H3CBR9_TETNGUncharacterized protein. (2454 aa)
H3CCB5_TETNGAspartyl-tRNA synthetase 2, mitochondrial. (606 aa)
H3CD80_TETNGRPA_C domain-containing protein. (253 aa)
Q4SZY2_TETNGChromosome undetermined SCAF10102, whole genome shotgun sequence; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (143 aa)
Q4T2Y2_TETNGChromosome 5 SCAF10152, whole genome shotgun sequence. (1278 aa)
H3CGD4_TETNGRep_fac-A_C domain-containing protein. (161 aa)
H3CGP2_TETNGDIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (925 aa)
H3CH25_TETNGDNA_LIGASE_A3 domain-containing protein. (172 aa)
MRPS12Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (137 aa)
H3CH92_TETNGCold shock domain containing C2. (151 aa)
H3CH93_TETNGPolymerase (RNA) III (DNA directed) polypeptide H. (216 aa)
H3CI49_TETNGProteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (391 aa)
H3CI86_TETNGRibosomal protein L8. (257 aa)
H3CL83_TETNGMinichromosome maintenance complex component 5. (640 aa)
H3CLJ2_TETNGExosome component 3. (248 aa)
H3CMF9_TETNGEukaryotic translation initiation factor 5A. (151 aa)
H3CN65_TETNGMinichromosome maintenance 10 replication initiation factor. (847 aa)
H3CP75_TETNGMCM domain-containing protein; Belongs to the MCM family. (397 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (747 aa)
SRBD1S1 RNA binding domain 1. (1022 aa)
H3CPY0_TETNGSPOUT domain containing methyltransferase 1. (357 aa)
dis3l2DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. (817 aa)
H3CR41_TETNGDNA helicase; Belongs to the MCM family. (813 aa)
H3CSW2_TETNGDNA helicase; Belongs to the MCM family. (860 aa)
H3CTD1_TETNGCell division cycle and apoptosis regulator 1. (1144 aa)
H3CTZ6_TETNGNucleic acid binding protein 1a. (188 aa)
Q4SJH9_TETNGChromosome 4 SCAF14575, whole genome shotgun sequence. (1465 aa)
H3CV18_TETNGTyrosine--tRNA ligase. (521 aa)
H3CVD5_TETNGLysine--tRNA ligase. (571 aa)
Q4SGW6_TETNGChromosome 14 SCAF14590, whole genome shotgun sequence; Belongs to the AAA ATPase family. (440 aa)
H3CWQ6_TETNGLin-28 homolog A (C. elegans). (163 aa)
H3CWV5_TETNGMinichromosome maintenance 8 homologous recombination repair factor; Belongs to the MCM family. (751 aa)
YBX2Y-box binding protein 2. (321 aa)
EIF5AL1Eukaryotic translation initiation factor 5A. (167 aa)
H3CYB9_TETNGDNA ligase. (898 aa)
H3CYH8_TETNGProtection of telomeres 1 homolog. (633 aa)
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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