(68 nodes) FERM superfamily, second domain network (Tetraodon nigroviridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3CRE0_TETNG	Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2037 aa)
	H3CSI9_TETNG	Talin 2b. (2335 aa)
	H3CU46_TETNG	Si:dkey-178k16.1. (800 aa)
	H3CUU3_TETNG	FERM domain-containing protein. (284 aa)
	H3CW78_TETNG	Protein tyrosine kinase 2ab; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1094 aa)
	H3CXH8_TETNG	Tyrosine-protein kinase. (1098 aa)
	H3CYW0_TETNG	Ezrin a. (573 aa)
	H3CZN5_TETNG	FERM domain containing 8. (440 aa)
	EPB41L2	Erythrocyte membrane protein band 4.1 like 2. (948 aa)
	H3D0Z3_TETNG	FERM domain-containing protein. (313 aa)
	H3D1B2_TETNG	Talin 2a. (2549 aa)
	H3D1R8_TETNG	Myosin XVAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2309 aa)
	PLEKHH3	Pleckstrin homology, MyTH4 and FERM domain containing H3. (697 aa)
	H3D2P3_TETNG	Moesin a. (592 aa)
	H3D4U3_TETNG	FERM domain containing 4Bb. (914 aa)
	H3D7M6_TETNG	FERM domain-containing protein. (564 aa)
	H3D8C8_TETNG	Si:ch73-194h10.2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2065 aa)
	H3D8X7_TETNG	Toll-like receptor 7. (1173 aa)
	H3D8Z5_TETNG	FERM domain-containing protein. (184 aa)
	Q4RZB9_TETNG	Chromosome 1 SCAF14944, whole genome shotgun sequence. (975 aa)
	H3DAJ0_TETNG	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1017 aa)
	RDX	Radixin. (581 aa)
	FRMPD4	FERM and PDZ domain containing 4. (1298 aa)
	H3DBL8_TETNG	Erythrocyte membrane protein band 4.1-like 3b. (903 aa)
	H3DDT4_TETNG	Neurofibromin 2a (merlin). (593 aa)
	H3DE15_TETNG	FERM domain-containing protein. (571 aa)
	H3DEC0_TETNG	Moesin b. (579 aa)
	H3DFF0_TETNG	Neurofibromin 2b (merlin). (601 aa)
	H3DFZ9_TETNG	Protein tyrosine kinase 2 beta, b; Belongs to the protein kinase superfamily. Tyr protein kinase family. (998 aa)
	PTPN14	Protein tyrosine phosphatase non-receptor type 14. (1205 aa)
	H3DG58_TETNG	Ezrin b. (597 aa)
	H3DGD2_TETNG	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1588 aa)
	FRMPD2	FERM and PDZ domain containing 2. (1154 aa)
	H3DGP3_TETNG	FERM domain-containing protein. (548 aa)
	H3DI91_TETNG	Pleckstrin homology domain containing, family H (with MyTH4 domain) member 2. (1470 aa)
	H3DIM6_TETNG	Fermitin family member 2. (673 aa)
	H3DIN7_TETNG	Protein tyrosine phosphatase non-receptor type 21. (1203 aa)
	H3DJI2_TETNG	KRIT1 ankyrin repeat containing. (742 aa)
	H3DPT0_TETNG	FERM domain containing 6. (617 aa)
	FRMD4A	FERM domain containing 4A. (1052 aa)
	H3DPN5_TETNG	Pleckstrin homology domain containing, family H (with MyTH4 domain) member 1. (1441 aa)
	FRMD5	FERM domain containing 5. (544 aa)
	H3DM79_TETNG	FERM domain-containing protein. (783 aa)
	H3DLY7_TETNG	Protein tyrosine phosphatase non-receptor type 3. (859 aa)
	H3DL74_TETNG	Tyrosine-protein kinase. (1162 aa)
	H3C0X6_TETNG	Erythrocyte membrane protein band 4.1a. (754 aa)
	H3BZC5_TETNG	FERM domain-containing protein. (405 aa)
	H3BWE9_TETNG	Erythrocyte membrane protein band 4.1 like 4B. (516 aa)
	H3BVZ0_TETNG	FERM domain containing 5. (554 aa)
	H3C1B2_TETNG	Erythrocyte membrane protein band 4.1 like 5. (790 aa)
	H3C3S6_TETNG	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1927 aa)
	H3C4L1_TETNG	Myosin X, like 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1997 aa)
	H3C6C7_TETNG	FERM domain containing 3. (603 aa)
	H3C6I4_TETNG	FERM, RhoGEF and pleckstrin domain protein 2. (1036 aa)
	H3C6Q0_TETNG	Uncharacterized protein. (481 aa)
	H3C837_TETNG	Tyrosine-protein kinase. (1011 aa)
	H3C8Y1_TETNG	FERM domain-containing protein. (185 aa)
	H3CCC0_TETNG	FERM and PDZ domain containing 2. (1103 aa)
	H3CCJ4_TETNG	Fermitin family member 3b. (528 aa)
	H3CDI9_TETNG	Myosin VIIAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2209 aa)
	H3CG76_TETNG	Uncharacterized protein. (1554 aa)
	H3CHM4_TETNG	Myosin regulatory light chain interacting protein a. (474 aa)
	H3CMU8_TETNG	Fermitin family member 1. (668 aa)
	H3CPG8_TETNG	FERM domain-containing protein. (804 aa)
	H3CPI3_TETNG	FERM domain containing 4Ba. (1031 aa)
	H3CQ08_TETNG	Tyrosine-protein phosphatase non-receptor type 13; Regulates negatively FAS-induced apoptosis and NGFR-mediated pro-apoptotic signaling. (2451 aa)
	H3CQ44_TETNG	Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily. (931 aa)
	H3CR28_TETNG	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2097 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3BZC5_TETNG	H3CUU3_TETNG	ENSTNIP00000001341	ENSTNIP00000012027	FERM domain-containing protein.	FERM domain-containing protein.	0.430
H3BZC5_TETNG	H3CW78_TETNG	ENSTNIP00000001341	ENSTNIP00000012512	FERM domain-containing protein.	Protein tyrosine kinase 2ab; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.430
H3BZC5_TETNG	H3DAJ0_TETNG	ENSTNIP00000001341	ENSTNIP00000017531	FERM domain-containing protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.403
H3BZC5_TETNG	H3DFZ9_TETNG	ENSTNIP00000001341	ENSTNIP00000019443	FERM domain-containing protein.	Protein tyrosine kinase 2 beta, b; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.403
H3C1B2_TETNG	H3DM79_TETNG	ENSTNIP00000002028	ENSTNIP00000021627	Erythrocyte membrane protein band 4.1 like 5.	FERM domain-containing protein.	0.405
H3C837_TETNG	H3CUU3_TETNG	ENSTNIP00000004409	ENSTNIP00000012027	Tyrosine-protein kinase.	FERM domain-containing protein.	0.446
H3C837_TETNG	H3CW78_TETNG	ENSTNIP00000004409	ENSTNIP00000012512	Tyrosine-protein kinase.	Protein tyrosine kinase 2ab; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.446
H3C837_TETNG	H3DAJ0_TETNG	ENSTNIP00000004409	ENSTNIP00000017531	Tyrosine-protein kinase.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.446
H3C837_TETNG	H3DFZ9_TETNG	ENSTNIP00000004409	ENSTNIP00000019443	Tyrosine-protein kinase.	Protein tyrosine kinase 2 beta, b; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.446
H3C837_TETNG	H3DL74_TETNG	ENSTNIP00000004409	ENSTNIP00000021272	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.407
H3C8Y1_TETNG	H3CUU3_TETNG	ENSTNIP00000004703	ENSTNIP00000012027	FERM domain-containing protein.	FERM domain-containing protein.	0.430
H3C8Y1_TETNG	H3CW78_TETNG	ENSTNIP00000004703	ENSTNIP00000012512	FERM domain-containing protein.	Protein tyrosine kinase 2ab; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.430
H3C8Y1_TETNG	H3DAJ0_TETNG	ENSTNIP00000004703	ENSTNIP00000017531	FERM domain-containing protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.403
H3C8Y1_TETNG	H3DFZ9_TETNG	ENSTNIP00000004703	ENSTNIP00000019443	FERM domain-containing protein.	Protein tyrosine kinase 2 beta, b; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.403
H3CHM4_TETNG	H3DGP3_TETNG	ENSTNIP00000007752	ENSTNIP00000019687	Myosin regulatory light chain interacting protein a.	FERM domain-containing protein.	0.407
H3CHM4_TETNG	H3DPT0_TETNG	ENSTNIP00000007752	ENSTNIP00000022529	Myosin regulatory light chain interacting protein a.	FERM domain containing 6.	0.407
H3CSI9_TETNG	H3CUU3_TETNG	ENSTNIP00000011223	ENSTNIP00000012027	Talin 2b.	FERM domain-containing protein.	0.404
H3CSI9_TETNG	H3CW78_TETNG	ENSTNIP00000011223	ENSTNIP00000012512	Talin 2b.	Protein tyrosine kinase 2ab; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.404
H3CSI9_TETNG	H3DAJ0_TETNG	ENSTNIP00000011223	ENSTNIP00000017531	Talin 2b.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.403
H3CSI9_TETNG	H3DFZ9_TETNG	ENSTNIP00000011223	ENSTNIP00000019443	Talin 2b.	Protein tyrosine kinase 2 beta, b; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.403