(36 nodes) The canonical retinoid cycle in rods (twilight vision) network (Tetraodon nigroviridis)

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Predicted Interactions

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Your Input:
	H3DBM4_TETNG	ATP-binding cassette, sub-family A (ABC1), member 4b. (2267 aa)
	rho	Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. While most salt water fish species use retinal as chromophore, most freshwater fish use 3-dehydroretinal, or a mixture of retinal and 3-dehydroretinal (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G-proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by arrestin and terminates signaling (By similarity). (353 aa)
	RHO	Rhodopsin. (353 aa)
	H3DMU7_TETNG	Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (319 aa)
	Q4RG62_TETNG	Chromosome 2 SCAF15106, whole genome shotgun sequence; Belongs to the calycin superfamily. Lipocalin family. (191 aa)
	H3DPD2_TETNG	Patched domain containing 4. (507 aa)
	H3DQU0_TETNG	Retinol dehydrogenase 5 (11-cis/9-cis); Belongs to the short-chain dehydrogenases/reductases (SDR) family. (268 aa)
	H3DB77_TETNG	Retinol dehydrogenase 20; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (321 aa)
	H3DAW7_TETNG	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (313 aa)
	H3D7Y0_TETNG	Patched domain containing 1. (903 aa)
	DHRS9	Uncharacterized protein. (545 aa)
	H3D456_TETNG	Retinoid isomerohydrolase RPE65 b. (533 aa)
	H3CYP6_TETNG	Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. (151 aa)
	Q4SE82_TETNG	Chromosome undetermined SCAF14625, whole genome shotgun sequence. (307 aa)
	H3CCK6_TETNG	Sphingomyelin phosphodiesterase, acid-like 3A. (411 aa)
	H3CVY2_TETNG	Retinaldehyde binding protein 1a. (312 aa)
	H3CTK4_TETNG	ATP-binding cassette, sub-family A (ABC1), member 4a. (1027 aa)
	H3CSW9_TETNG	Retinoid isomerohydrolase RPE65 a. (531 aa)
	Q4SMW0_TETNG	Chromosome 6 SCAF14544, whole genome shotgun sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (340 aa)
	PTCHD3	Patched domain containing 3. (821 aa)
	H3CQ52_TETNG	N-acyl phosphatidylethanolamine phospholipase D. (397 aa)
	H3CNU3_TETNG	Cytochrome P450, family 4, subfamily V, polypeptide 8; Belongs to the cytochrome P450 family. (515 aa)
	Q4SRZ4_TETNG	Chromosome 18 SCAF14485, whole genome shotgun sequence. (213 aa)
	H3C7P4_TETNG	LRAT domain-containing protein. (241 aa)
	H3C3S6_TETNG	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1927 aa)
	H3C3N8_TETNG	Stimulated by retinoic acid 6. (651 aa)
	H3C2G0_TETNG	Rhodopsin. (352 aa)
	H3C0V4_TETNG	Uncharacterized protein. (282 aa)
	H3BZJ8_TETNG	Patched domain containing 4. (299 aa)
	H3BZD6_TETNG	G_PROTEIN_RECEP_F1_2 domain-containing protein. (98 aa)
	H3CHU5_TETNG	Uncharacterized protein. (701 aa)
	H3CDI9_TETNG	Myosin VIIAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2209 aa)
	Q4T5P6_TETNG	Chromosome undetermined SCAF9168, whole genome shotgun sequence; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (204 aa)
	Q4T3T1_TETNG	Chromosome undetermined SCAF9929, whole genome shotgun sequence. (632 aa)
	H3CGH8_TETNG	Retinol binding protein 3. (629 aa)
	H3CNT7_TETNG	Lecithin retinol acyltransferase a. (234 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DHRS9	H3C7P4_TETNG	ENSTNIP00000016254	ENSTNIP00000004266	Uncharacterized protein.	LRAT domain-containing protein.	0.690
DHRS9	H3CNT7_TETNG	ENSTNIP00000016254	ENSTNIP00000009920	Uncharacterized protein.	Lecithin retinol acyltransferase a.	0.690
DHRS9	Q4SRZ4_TETNG	ENSTNIP00000016254	ENSTNIP00000009921	Uncharacterized protein.	Chromosome 18 SCAF14485, whole genome shotgun sequence.	0.689
H3BZD6_TETNG	H3CGH8_TETNG	ENSTNIP00000001352	ENSTNIP00000007356	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Retinol binding protein 3.	0.577
H3BZJ8_TETNG	H3DPD2_TETNG	ENSTNIP00000001414	ENSTNIP00000022381	Patched domain containing 4.	Patched domain containing 4.	0.899
H3C0V4_TETNG	H3CTK4_TETNG	ENSTNIP00000001870	ENSTNIP00000011588	Uncharacterized protein.	ATP-binding cassette, sub-family A (ABC1), member 4a.	0.559
H3C2G0_TETNG	H3CGH8_TETNG	ENSTNIP00000002428	ENSTNIP00000007356	Rhodopsin.	Retinol binding protein 3.	0.577
H3C2G0_TETNG	RHO	ENSTNIP00000002428	ENSTNIP00000021086	Rhodopsin.	Rhodopsin.	0.910
H3C2G0_TETNG	rho	ENSTNIP00000002428	ENSTNIP00000021070	Rhodopsin.	Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. While most salt water fish species use retinal as chromophore, most freshwater fish use 3-dehydroretinal, or a mixture of retinal and 3-dehydroretinal (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G-proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by arrestin and terminates signaling (By similarity).	0.910
H3C3N8_TETNG	H3CYP6_TETNG	ENSTNIP00000002857	ENSTNIP00000013381	Stimulated by retinoic acid 6.	Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.	0.837
H3C3N8_TETNG	H3DMU7_TETNG	ENSTNIP00000002857	ENSTNIP00000021845	Stimulated by retinoic acid 6.	Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.460
H3C3N8_TETNG	Q4RG62_TETNG	ENSTNIP00000002857	ENSTNIP00000022093	Stimulated by retinoic acid 6.	Chromosome 2 SCAF15106, whole genome shotgun sequence; Belongs to the calycin superfamily. Lipocalin family.	0.767
H3C3S6_TETNG	Q4T5P6_TETNG	ENSTNIP00000002895	ENSTNIP00000006692	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Chromosome undetermined SCAF9168, whole genome shotgun sequence; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.891
H3C7P4_TETNG	DHRS9	ENSTNIP00000004266	ENSTNIP00000016254	LRAT domain-containing protein.	Uncharacterized protein.	0.690
H3C7P4_TETNG	H3CSW9_TETNG	ENSTNIP00000004266	ENSTNIP00000011353	LRAT domain-containing protein.	Retinoid isomerohydrolase RPE65 a.	0.915
H3C7P4_TETNG	H3D456_TETNG	ENSTNIP00000004266	ENSTNIP00000015294	LRAT domain-containing protein.	Retinoid isomerohydrolase RPE65 b.	0.915
H3C7P4_TETNG	H3DB77_TETNG	ENSTNIP00000004266	ENSTNIP00000017769	LRAT domain-containing protein.	Retinol dehydrogenase 20; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.915
H3C7P4_TETNG	Q4SMW0_TETNG	ENSTNIP00000004266	ENSTNIP00000011008	LRAT domain-containing protein.	Chromosome 6 SCAF14544, whole genome shotgun sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.915
H3C7P4_TETNG	Q4T3T1_TETNG	ENSTNIP00000004266	ENSTNIP00000007103	LRAT domain-containing protein.	Chromosome undetermined SCAF9929, whole genome shotgun sequence.	0.911
H3CGH8_TETNG	H3BZD6_TETNG	ENSTNIP00000007356	ENSTNIP00000001352	Retinol binding protein 3.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.577