(33 nodes) Plasma lipoprotein assembly network (Tetraodon nigroviridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3D499_TETNG	Microsomal triglyceride transfer protein. (897 aa)
	H3D7Y0_TETNG	Patched domain containing 1. (903 aa)
	H3DH76_TETNG	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (769 aa)
	Q4RS28_TETNG	Chromosome 7 SCAF15001, whole genome shotgun sequence; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
	H3DA56_TETNG	Uncharacterized protein. (1437 aa)
	H3D3P8_TETNG	Uncharacterized protein; Belongs to the protein kinase superfamily. (339 aa)
	H3D442_TETNG	Vitellogenin domain-containing protein. (1357 aa)
	H3D443_TETNG	Vitellogenin domain-containing protein. (439 aa)
	H3D6G8_TETNG	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (515 aa)
	H3D957_TETNG	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b. (352 aa)
	H3DQG9_TETNG	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (639 aa)
	H3D9F6_TETNG	Protein disulfide-isomerase. (513 aa)
	H3DA29_TETNG	Apolipoprotein A-Ib. (260 aa)
	H3DA36_TETNG	Uncharacterized protein. (1450 aa)
	H3BVN8_TETNG	Uncharacterized protein. (207 aa)
	H3CSX4_TETNG	Uncharacterized protein; Belongs to the protein kinase superfamily. (351 aa)
	H3BVT1_TETNG	Vitellogenin 5. (1706 aa)
	H3BZJ8_TETNG	Patched domain containing 4. (299 aa)
	H3C0X3_TETNG	ATP-binding cassette, sub-family A (ABC1), member 1A. (2269 aa)
	H3CT98_TETNG	Secretion associated, Ras related GTPase 1Ab; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
	H3CUH1_TETNG	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (697 aa)
	H3CYL5_TETNG	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily. (351 aa)
	H3DQG1_TETNG	Uncharacterized protein. (307 aa)
	H3C1N3_TETNG	Uncharacterized protein. (317 aa)
	H3C6J5_TETNG	Vitellogenin 3, phosvitinless. (1241 aa)
	H3C771_TETNG	ATP-binding cassette, sub-family A (ABC1), member 2. (2415 aa)
	H3CCK6_TETNG	Sphingomyelin phosphodiesterase, acid-like 3A. (411 aa)
	H3CIQ9_TETNG	Protein disulfide-isomerase. (521 aa)
	H3CIW1_TETNG	DUF1943 domain-containing protein. (1698 aa)
	H3CJF5_TETNG	Uncharacterized protein. (1465 aa)
	H3CLI7_TETNG	ATP binding cassette subfamily A member 1. (2228 aa)
	PTCHD3	Patched domain containing 3. (821 aa)
	H3DPD2_TETNG	Patched domain containing 4. (507 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3BVN8_TETNG	H3BVT1_TETNG	ENSTNIP00000000050	ENSTNIP00000000093	Uncharacterized protein.	Vitellogenin 5.	0.699
H3BVN8_TETNG	H3C1N3_TETNG	ENSTNIP00000000050	ENSTNIP00000002149	Uncharacterized protein.	Uncharacterized protein.	0.753
H3BVN8_TETNG	H3C6J5_TETNG	ENSTNIP00000000050	ENSTNIP00000003865	Uncharacterized protein.	Vitellogenin 3, phosvitinless.	0.699
H3BVN8_TETNG	H3CIW1_TETNG	ENSTNIP00000000050	ENSTNIP00000008189	Uncharacterized protein.	DUF1943 domain-containing protein.	0.753
H3BVN8_TETNG	H3D442_TETNG	ENSTNIP00000000050	ENSTNIP00000015280	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.753
H3BVN8_TETNG	H3D443_TETNG	ENSTNIP00000000050	ENSTNIP00000015281	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.753
H3BVN8_TETNG	H3D499_TETNG	ENSTNIP00000000050	ENSTNIP00000015337	Uncharacterized protein.	Microsomal triglyceride transfer protein.	0.574
H3BVN8_TETNG	H3DA29_TETNG	ENSTNIP00000000050	ENSTNIP00000017370	Uncharacterized protein.	Apolipoprotein A-Ib.	0.804
H3BVT1_TETNG	H3BVN8_TETNG	ENSTNIP00000000093	ENSTNIP00000000050	Vitellogenin 5.	Uncharacterized protein.	0.699
H3BVT1_TETNG	H3D499_TETNG	ENSTNIP00000000093	ENSTNIP00000015337	Vitellogenin 5.	Microsomal triglyceride transfer protein.	0.825
H3BVT1_TETNG	H3DA29_TETNG	ENSTNIP00000000093	ENSTNIP00000017370	Vitellogenin 5.	Apolipoprotein A-Ib.	0.647
H3BZJ8_TETNG	H3DPD2_TETNG	ENSTNIP00000001414	ENSTNIP00000022381	Patched domain containing 4.	Patched domain containing 4.	0.899
H3C1N3_TETNG	H3BVN8_TETNG	ENSTNIP00000002149	ENSTNIP00000000050	Uncharacterized protein.	Uncharacterized protein.	0.753
H3C1N3_TETNG	H3CIQ9_TETNG	ENSTNIP00000002149	ENSTNIP00000008137	Uncharacterized protein.	Protein disulfide-isomerase.	0.568
H3C1N3_TETNG	H3D442_TETNG	ENSTNIP00000002149	ENSTNIP00000015280	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.868
H3C1N3_TETNG	H3D443_TETNG	ENSTNIP00000002149	ENSTNIP00000015281	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.437
H3C1N3_TETNG	H3D499_TETNG	ENSTNIP00000002149	ENSTNIP00000015337	Uncharacterized protein.	Microsomal triglyceride transfer protein.	0.885
H3C1N3_TETNG	H3D9F6_TETNG	ENSTNIP00000002149	ENSTNIP00000017147	Uncharacterized protein.	Protein disulfide-isomerase.	0.543
H3C1N3_TETNG	H3DA29_TETNG	ENSTNIP00000002149	ENSTNIP00000017370	Uncharacterized protein.	Apolipoprotein A-Ib.	0.698
H3C6J5_TETNG	H3BVN8_TETNG	ENSTNIP00000003865	ENSTNIP00000000050	Vitellogenin 3, phosvitinless.	Uncharacterized protein.	0.699