12 items (Tetraodon nigroviridis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3CNA0_TETNG	Regulator of G protein signaling 18. (236 aa)
	H3BZ54_TETNG	Regulator of G protein signaling 11. (487 aa)
	H3CN99_TETNG	Regulator of G protein signaling 13. (137 aa)
	H3CNA3_TETNG	Regulator of G protein signaling 5b. (178 aa)
	Q4SQY7_TETNG	Chromosome 11 SCAF14528, whole genome shotgun sequence. (191 aa)
	H3CS32_TETNG	Regulator of G protein signaling 8. (187 aa)
	H3D193_TETNG	Regulator of G protein signaling 19. (181 aa)
	H3D468_TETNG	Si:ch211-117l17.5. (143 aa)
	H3DHY9_TETNG	Regulator of G protein signaling 17. (209 aa)
	RGS20	Regulator of G protein signaling 20. (246 aa)
	H3DJ82_TETNG	Uncharacterized protein. (446 aa)
	H3DMR6_TETNG	RGS domain-containing protein. (174 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3BZ54_TETNG	H3DJ82_TETNG	ENSTNIP00000001270	ENSTNIP00000020578	Regulator of G protein signaling 11.	Uncharacterized protein.	0.450
H3CN99_TETNG	H3CNA0_TETNG	ENSTNIP00000009730	ENSTNIP00000009731	Regulator of G protein signaling 13.	Regulator of G protein signaling 18.	0.428
H3CN99_TETNG	H3CS32_TETNG	ENSTNIP00000009730	ENSTNIP00000011066	Regulator of G protein signaling 13.	Regulator of G protein signaling 8.	0.410
H3CNA0_TETNG	H3CN99_TETNG	ENSTNIP00000009731	ENSTNIP00000009730	Regulator of G protein signaling 18.	Regulator of G protein signaling 13.	0.428
H3CNA0_TETNG	H3CNA3_TETNG	ENSTNIP00000009731	ENSTNIP00000009734	Regulator of G protein signaling 18.	Regulator of G protein signaling 5b.	0.478
H3CNA0_TETNG	H3CS32_TETNG	ENSTNIP00000009731	ENSTNIP00000011066	Regulator of G protein signaling 18.	Regulator of G protein signaling 8.	0.595
H3CNA0_TETNG	H3D193_TETNG	ENSTNIP00000009731	ENSTNIP00000014279	Regulator of G protein signaling 18.	Regulator of G protein signaling 19.	0.414
H3CNA0_TETNG	H3D468_TETNG	ENSTNIP00000009731	ENSTNIP00000015306	Regulator of G protein signaling 18.	Si:ch211-117l17.5.	0.430
H3CNA0_TETNG	H3DHY9_TETNG	ENSTNIP00000009731	ENSTNIP00000020133	Regulator of G protein signaling 18.	Regulator of G protein signaling 17.	0.412
H3CNA0_TETNG	H3DMR6_TETNG	ENSTNIP00000009731	ENSTNIP00000021814	Regulator of G protein signaling 18.	RGS domain-containing protein.	0.429
H3CNA0_TETNG	RGS20	ENSTNIP00000009731	ENSTNIP00000020261	Regulator of G protein signaling 18.	Regulator of G protein signaling 20.	0.412
H3CNA3_TETNG	H3CNA0_TETNG	ENSTNIP00000009734	ENSTNIP00000009731	Regulator of G protein signaling 5b.	Regulator of G protein signaling 18.	0.478
H3CNA3_TETNG	H3CS32_TETNG	ENSTNIP00000009734	ENSTNIP00000011066	Regulator of G protein signaling 5b.	Regulator of G protein signaling 8.	0.467
H3CS32_TETNG	H3CN99_TETNG	ENSTNIP00000011066	ENSTNIP00000009730	Regulator of G protein signaling 8.	Regulator of G protein signaling 13.	0.410
H3CS32_TETNG	H3CNA0_TETNG	ENSTNIP00000011066	ENSTNIP00000009731	Regulator of G protein signaling 8.	Regulator of G protein signaling 18.	0.595
H3CS32_TETNG	H3CNA3_TETNG	ENSTNIP00000011066	ENSTNIP00000009734	Regulator of G protein signaling 8.	Regulator of G protein signaling 5b.	0.467
H3CS32_TETNG	H3D468_TETNG	ENSTNIP00000011066	ENSTNIP00000015306	Regulator of G protein signaling 8.	Si:ch211-117l17.5.	0.407
H3CS32_TETNG	H3DMR6_TETNG	ENSTNIP00000011066	ENSTNIP00000021814	Regulator of G protein signaling 8.	RGS domain-containing protein.	0.416
H3CS32_TETNG	RGS20	ENSTNIP00000011066	ENSTNIP00000020261	Regulator of G protein signaling 8.	Regulator of G protein signaling 20.	0.418
H3D193_TETNG	H3CNA0_TETNG	ENSTNIP00000014279	ENSTNIP00000009731	Regulator of G protein signaling 19.	Regulator of G protein signaling 18.	0.414