(46 nodes) SANT SWI3, ADA2, N-CoR and TFIIIB DNA-binding domains network (Tetraodon nigroviridis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3C9V8_TETNG	Myb-like domain-containing protein. (401 aa)
	H3CA65_TETNG	REST corepressor 1. (387 aa)
	H3CAE4_TETNG	Cramped chromatin regulator homolog 1. (1173 aa)
	H3CDB0_TETNG	Nuclear receptor corepressor 2. (1958 aa)
	H3CDB1_TETNG	E1A binding protein p400. (2565 aa)
	H3CDD9_TETNG	ELM2 and Myb/SANT-like domain containing 1a. (768 aa)
	H3CDE6_TETNG	Uncharacterized protein. (1087 aa)
	H3CEU8_TETNG	PRC2_HTH_1 domain-containing protein. (354 aa)
	H3CF02_TETNG	PRC2_HTH_1 domain-containing protein. (352 aa)
	H3CSZ3_TETNG	Nuclear receptor corepressor 1. (2332 aa)
	H3CWV8_TETNG	CDC5 cell division cycle 5-like (S. pombe). (804 aa)
	H3CXL7_TETNG	V-myb avian myeloblastosis viral oncogene homolog-like 1. (751 aa)
	EZH1	Enhancer of zeste 1 polycomb repressive complex 2 subunit. (738 aa)
	H3D658_TETNG	Uncharacterized protein. (257 aa)
	H3D7F9_TETNG	Zgc:162472. (320 aa)
	H3D8I8_TETNG	REST corepressor 2. (528 aa)
	H3DAR1_TETNG	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (987 aa)
	H3CNA8_TETNG	Mesoderm induction early response 1b, transcriptional regulator. (498 aa)
	H3DBF1_TETNG	Uncharacterized protein. (395 aa)
	H3DCG7_TETNG	Arginine-glutamic acid dipeptide (RE) repeats a. (1548 aa)
	H3DDD3_TETNG	Mesoderm induction early response 1, family member 2. (303 aa)
	H3DDK9_TETNG	DNA methyltransferase 1 associated protein 1. (467 aa)
	H3DFM6_TETNG	Transcriptional adapter. (445 aa)
	H3DFW9_TETNG	V-myb avian myeloblastosis viral oncogene homolog. (594 aa)
	H3DJP2_TETNG	Mesoderm induction early response 1, family member 3 b. (556 aa)
	H3DK21_TETNG	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1045 aa)
	H3DK30_TETNG	Transcriptional adaptor 2B. (226 aa)
	H3DLL5_TETNG	Timeless circadian clock. (1121 aa)
	H3DN03_TETNG	Cyclin D binding myb-like transcription factor 1. (573 aa)
	H3DPM2_TETNG	ELM2 and Myb/SANT-like domain containing 1b. (602 aa)
	H3DPM5_TETNG	Metastasis associated 1. (551 aa)
	H3DQV0_TETNG	Myb-like domain-containing protein. (156 aa)
	H3DB48_TETNG	Arginine-glutamic acid dipeptide (RE) repeats b. (1179 aa)
	H3CG45_TETNG	Metastasis associated 1 family, member 2. (665 aa)
	H3CH46_TETNG	Uncharacterized protein. (117 aa)
	H3CHK5_TETNG	REST corepressor 3. (525 aa)
	H3CHP8_TETNG	DnaJ (Hsp40) homolog, subfamily C, member 2. (625 aa)
	H3CL24_TETNG	Myb-like, SWIRM and MPN domains 1. (793 aa)
	H3CLM3_TETNG	Uncharacterized protein. (242 aa)
	H3CPG3_TETNG	V-myb avian myeloblastosis viral oncogene homolog-like 2b. (624 aa)
	H3CQG3_TETNG	Zgc:103508. (191 aa)
	CHD8	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2320 aa)
	H3C3L6_TETNG	Uncharacterized protein. (398 aa)
	H3C734_TETNG	Uncharacterized protein. (211 aa)
	H3C7N9_TETNG	Chromodomain helicase DNA binding protein 7. (2230 aa)
	H3C9V0_TETNG	Uncharacterized protein. (469 aa)

Your Current Organism:

Tetraodon nigroviridis

NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHD8	H3CL24_TETNG	ENSTNIP00000010752	ENSTNIP00000008953	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...]	Myb-like, SWIRM and MPN domains 1.	0.438
CHD8	H3CQG3_TETNG	ENSTNIP00000010752	ENSTNIP00000010497	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...]	Zgc:103508.	0.400
CHD8	H3DDK9_TETNG	ENSTNIP00000010752	ENSTNIP00000018602	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...]	DNA methyltransferase 1 associated protein 1.	0.403
CHD8	H3DK21_TETNG	ENSTNIP00000010752	ENSTNIP00000020867	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...]	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.423
H3C7N9_TETNG	H3CL24_TETNG	ENSTNIP00000004261	ENSTNIP00000008953	Chromodomain helicase DNA binding protein 7.	Myb-like, SWIRM and MPN domains 1.	0.438
H3C7N9_TETNG	H3DDK9_TETNG	ENSTNIP00000004261	ENSTNIP00000018602	Chromodomain helicase DNA binding protein 7.	DNA methyltransferase 1 associated protein 1.	0.403
H3C7N9_TETNG	H3DK21_TETNG	ENSTNIP00000004261	ENSTNIP00000020867	Chromodomain helicase DNA binding protein 7.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.427
H3C9V0_TETNG	H3D7F9_TETNG	ENSTNIP00000005022	ENSTNIP00000016450	Uncharacterized protein.	Zgc:162472.	0.674
H3CA65_TETNG	H3CG45_TETNG	ENSTNIP00000005137	ENSTNIP00000007222	REST corepressor 1.	Metastasis associated 1 family, member 2.	0.408
H3CA65_TETNG	H3DK21_TETNG	ENSTNIP00000005137	ENSTNIP00000020867	REST corepressor 1.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.403
H3CA65_TETNG	H3DPM5_TETNG	ENSTNIP00000005137	ENSTNIP00000022474	REST corepressor 1.	Metastasis associated 1.	0.408
H3CDB0_TETNG	H3DFM6_TETNG	ENSTNIP00000006233	ENSTNIP00000019320	Nuclear receptor corepressor 2.	Transcriptional adapter.	0.681
H3CDB0_TETNG	H3DK30_TETNG	ENSTNIP00000006233	ENSTNIP00000020876	Nuclear receptor corepressor 2.	Transcriptional adaptor 2B.	0.729
H3CDB1_TETNG	H3CL24_TETNG	ENSTNIP00000006234	ENSTNIP00000008953	E1A binding protein p400.	Myb-like, SWIRM and MPN domains 1.	0.412
H3CDB1_TETNG	H3DDK9_TETNG	ENSTNIP00000006234	ENSTNIP00000018602	E1A binding protein p400.	DNA methyltransferase 1 associated protein 1.	0.901
H3CDD9_TETNG	H3D658_TETNG	ENSTNIP00000006262	ENSTNIP00000015998	ELM2 and Myb/SANT-like domain containing 1a.	Uncharacterized protein.	0.432
H3CDE6_TETNG	H3DAR1_TETNG	ENSTNIP00000006269	ENSTNIP00000017603	Uncharacterized protein.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.	0.407
H3CDE6_TETNG	H3DK21_TETNG	ENSTNIP00000006269	ENSTNIP00000020867	Uncharacterized protein.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.595
H3CG45_TETNG	H3CA65_TETNG	ENSTNIP00000007222	ENSTNIP00000005137	Metastasis associated 1 family, member 2.	REST corepressor 1.	0.408
H3CG45_TETNG	H3CHK5_TETNG	ENSTNIP00000007222	ENSTNIP00000007733	Metastasis associated 1 family, member 2.	REST corepressor 3.	0.408