STRINGSTRING
lysK lysK AHC99740.1 AHC99740.1 AHC99977.1 AHC99977.1 AHD00240.1 AHD00240.1 AHD00583.1 AHD00583.1 AHD01046.1 AHD01046.1 AHD01378.1 AHD01378.1 AHD01380.1 AHD01380.1 AHD01381.1 AHD01381.1 AHD01382.1 AHD01382.1 AHD02135.1 AHD02135.1 AHD02594.1 AHD02594.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lysKlysyl-tRNA synthetase; Class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. (547 aa)
AHC99740.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
AHC99977.1aspartyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
AHD00240.1Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (247 aa)
AHD00583.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)
AHD01046.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
AHD01378.1Aerobic cobaltochelatase subunit CobS; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
AHD01380.1Cobalt chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (625 aa)
AHD01381.1X-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (596 aa)
AHD01382.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)
AHD02135.1ETC complex I subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa)
AHD02594.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
Your Current Organism:
Leisingera methylohalidivorans
NCBI taxonomy Id: 999552
Other names: L. methylohalidivorans DSM 14336, Leisingera methylohalidivorans DSM 14336, Leisingera methylohalidivorans MB2, Leisingera methylohalidivorans str. DSM 14336, Leisingera methylohalidivorans strain DSM 14336
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