29 items (Botrytis cinerea T4) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G2XSQ8_BOTF4	Similar to RNA polymerase II transcription factor. (613 aa)
	G2XUM9_BOTF4	Uncharacterized protein. (323 aa)
	G2XUV6_BOTF4	Uncharacterized protein. (1002 aa)
	G2XVG3_BOTF4	Uncharacterized protein. (208 aa)
	G2XWM6_BOTF4	RNA_pol_L_2 domain-containing protein. (148 aa)
	G2XXR8_BOTF4	Uncharacterized protein. (506 aa)
	G2XXR9_BOTF4	Similar to POLR1B protein. (556 aa)
	G2XYD7_BOTF4	Similar to RNA polymerase I-specific transcription initiation factor rrn3. (675 aa)
	G2Y1K6_BOTF4	Similar to serine/threonine-protein kinase; Belongs to the protein kinase superfamily. (400 aa)
	G2Y229_BOTF4	Similar to DNA-directed RNA polymerases I/II/III subunit. (68 aa)
	G2Y2M9_BOTF4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1703 aa)
	G2Y3C6_BOTF4	SANT domain-containing protein. (706 aa)
	G2YC29_BOTF4	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (345 aa)
	G2YC86_BOTF4	Helicase C-terminal domain-containing protein. (206 aa)
	G2YC87_BOTF4	Helicase ATP-binding domain-containing protein. (1443 aa)
	G2YC88_BOTF4	Uncharacterized protein. (248 aa)
	G2YD01_BOTF4	Similar to RNA polymerase II transcription elongation factor (Ctr9). (1234 aa)
	G2YG99_BOTF4	Uncharacterized protein. (472 aa)
	G2YII3_BOTF4	Similar to RNA polymerase I subunit A49. (449 aa)
	G2YKB4_BOTF4	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (151 aa)
	G2YKM0_BOTF4	Similar to metallothionein-I gene transcription activator. (78 aa)
	G2YLC8_BOTF4	Uncharacterized protein. (519 aa)
	G2YPL6_BOTF4	Similar to transcription elongation factor s-ii. (301 aa)
	G2YQD7_BOTF4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (121 aa)
	G2YRD3_BOTF4	Similar to DNA-directed RNA polymerase I. (163 aa)
	G2YTQ4_BOTF4	SWIB domain-containing protein. (268 aa)
	G2YUQ1_BOTF4	SAP30_Sin3_bdg domain-containing protein. (185 aa)
	G2YVN9_BOTF4	Uncharacterized protein. (1201 aa)
	G2YZC4_BOTF4	Similar to DNA-directed RNA polymerases I and III subunit RPAC1. (389 aa)

Your Current Organism:

Botrytis cinerea T4

NCBI taxonomy Id: 999810
Other names: B. cinerea T4, Botryotinia fuckeliana T4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G2XSQ8_BOTF4	G2XXR8_BOTF4	G2XSQ8	G2XXR8	Similar to RNA polymerase II transcription factor.	Uncharacterized protein.	0.884
G2XSQ8_BOTF4	G2XXR9_BOTF4	G2XSQ8	G2XXR9	Similar to RNA polymerase II transcription factor.	Similar to POLR1B protein.	0.884
G2XSQ8_BOTF4	G2Y1K6_BOTF4	G2XSQ8	G2Y1K6	Similar to RNA polymerase II transcription factor.	Similar to serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	0.985
G2XSQ8_BOTF4	G2Y229_BOTF4	G2XSQ8	G2Y229	Similar to RNA polymerase II transcription factor.	Similar to DNA-directed RNA polymerases I/II/III subunit.	0.971
G2XSQ8_BOTF4	G2YD01_BOTF4	G2XSQ8	G2YD01	Similar to RNA polymerase II transcription factor.	Similar to RNA polymerase II transcription elongation factor (Ctr9).	0.561
G2XSQ8_BOTF4	G2YII3_BOTF4	G2XSQ8	G2YII3	Similar to RNA polymerase II transcription factor.	Similar to RNA polymerase I subunit A49.	0.693
G2XSQ8_BOTF4	G2YKB4_BOTF4	G2XSQ8	G2YKB4	Similar to RNA polymerase II transcription factor.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.971
G2XSQ8_BOTF4	G2YKM0_BOTF4	G2XSQ8	G2YKM0	Similar to RNA polymerase II transcription factor.	Similar to metallothionein-I gene transcription activator.	0.971
G2XSQ8_BOTF4	G2YPL6_BOTF4	G2XSQ8	G2YPL6	Similar to RNA polymerase II transcription factor.	Similar to transcription elongation factor s-ii.	0.843
G2XSQ8_BOTF4	G2YQD7_BOTF4	G2XSQ8	G2YQD7	Similar to RNA polymerase II transcription factor.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.850
G2XSQ8_BOTF4	G2YRD3_BOTF4	G2XSQ8	G2YRD3	Similar to RNA polymerase II transcription factor.	Similar to DNA-directed RNA polymerase I.	0.975
G2XSQ8_BOTF4	G2YUQ1_BOTF4	G2XSQ8	G2YUQ1	Similar to RNA polymerase II transcription factor.	SAP30_Sin3_bdg domain-containing protein.	0.850
G2XSQ8_BOTF4	G2YZC4_BOTF4	G2XSQ8	G2YZC4	Similar to RNA polymerase II transcription factor.	Similar to DNA-directed RNA polymerases I and III subunit RPAC1.	0.952
G2XUM9_BOTF4	G2XUV6_BOTF4	G2XUM9	G2XUV6	Uncharacterized protein.	Uncharacterized protein.	0.700
G2XUM9_BOTF4	G2XWM6_BOTF4	G2XUM9	G2XWM6	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.998
G2XUM9_BOTF4	G2XXR8_BOTF4	G2XUM9	G2XXR8	Uncharacterized protein.	Uncharacterized protein.	0.986
G2XUM9_BOTF4	G2XXR9_BOTF4	G2XUM9	G2XXR9	Uncharacterized protein.	Similar to POLR1B protein.	0.986
G2XUM9_BOTF4	G2XYD7_BOTF4	G2XUM9	G2XYD7	Uncharacterized protein.	Similar to RNA polymerase I-specific transcription initiation factor rrn3.	0.998
G2XUM9_BOTF4	G2Y229_BOTF4	G2XUM9	G2Y229	Uncharacterized protein.	Similar to DNA-directed RNA polymerases I/II/III subunit.	0.997
G2XUM9_BOTF4	G2Y2M9_BOTF4	G2XUM9	G2Y2M9	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999