36 items (Botrytis cinerea T4) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G2YSM3_BOTF4	Similar to glucose-regulated protein; Belongs to the heat shock protein 70 family. (670 aa)
	G2YQP1_BOTF4	Similar to transmembrane bax inhibitor motif-containing protein 4; Belongs to the BI1 family. (278 aa)
	G2YPQ2_BOTF4	Similar to misfolded glycoproteins degradation protein Yos9. (508 aa)
	G2YJR2_BOTF4	Similar to cell division control protein. (160 aa)
	G2YJR1_BOTF4	Uncharacterized protein; Belongs to the AAA ATPase family. (648 aa)
	G2YFB1_BOTF4	Similar to outer membrane protein iml2. (691 aa)
	G2YDN3_BOTF4	Similar to clock-controlled protein 8. (573 aa)
	G2YDE4_BOTF4	Similar to nuclear envelope protein Cut8; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (270 aa)
	G2YCY1_BOTF4	Ubiquitin carboxyl-terminal hydrolase. (319 aa)
	G2YCS4_BOTF4	Similar to heat shock protein; Belongs to the ClpA/ClpB family. (946 aa)
	G2YC45_BOTF4	RING-type domain-containing protein. (283 aa)
	G2YC38_BOTF4	RING-type domain-containing protein. (226 aa)
	G2YBU4_BOTF4	Similar to DnaJ protein. (416 aa)
	G2YBE9_BOTF4	Similar to transcription factor Zn, C2H2. (357 aa)
	G2YB95_BOTF4	Glycosyltransferase family 24 protein. (1491 aa)
	G2YAF5_BOTF4	Uncharacterized protein. (146 aa)
	G2Y9V4_BOTF4	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (258 aa)
	G2Y392_BOTF4	RING-type domain-containing protein. (699 aa)
	G2Y1F0_BOTF4	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (456 aa)
	G2Y047_BOTF4	Similar to transcription factor Zn, C2H2, partial sequence. (154 aa)
	G2Y046_BOTF4	Similar to transcription factor Zn, C2H2, partial sequence. (486 aa)
	G2XYG3_BOTF4	Similar to nuclear protein localization protein 4. (640 aa)
	G2XV08_BOTF4	Similar to protein ORM1. (181 aa)
	G2XS94_BOTF4	Similar to hypoxia up-regulated 1. (424 aa)
	G2XS93_BOTF4	Uncharacterized protein. (626 aa)
	G2XRD2_BOTF4	Similar to vacuolar protein sorting-associated protein 74. (352 aa)
	G2XPL3_BOTF4	Similar to transcription factor bZIP. (395 aa)
	G2XP26_BOTF4	J domain-containing protein. (659 aa)
	G2YT10_BOTF4	Similar to ubiquitin fusion degradation protein (Ufd1). (792 aa)
	G2YTQ5_BOTF4	Similar to protein kinase and ribonuclease Ire1. (1184 aa)
	G2YTZ5_BOTF4	Similar to sulfate transporter. (462 aa)
	G2YUP2_BOTF4	Similar to mitochondrial heat shock protein; Belongs to the heat shock protein 70 family. (679 aa)
	G2YV97_BOTF4	RING-type domain-containing protein. (382 aa)
	G2YW25_BOTF4	Similar to DnaJ protein subfamily C member 3. (530 aa)
	G2YWV3_BOTF4	Uncharacterized protein. (456 aa)
	G2YYJ1_BOTF4	Similar to ER associated DnaJ chaperone (Hlj1). (356 aa)

Your Current Organism:

Botrytis cinerea T4

NCBI taxonomy Id: 999810
Other names: B. cinerea T4, Botryotinia fuckeliana T4

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G2XP26_BOTF4	G2XS93_BOTF4	G2XP26	G2XS93	J domain-containing protein.	Uncharacterized protein.	0.659
G2XP26_BOTF4	G2XS94_BOTF4	G2XP26	G2XS94	J domain-containing protein.	Similar to hypoxia up-regulated 1.	0.659
G2XP26_BOTF4	G2YBU4_BOTF4	G2XP26	G2YBU4	J domain-containing protein.	Similar to DnaJ protein.	0.542
G2XP26_BOTF4	G2YCS4_BOTF4	G2XP26	G2YCS4	J domain-containing protein.	Similar to heat shock protein; Belongs to the ClpA/ClpB family.	0.589
G2XP26_BOTF4	G2YSM3_BOTF4	G2XP26	G2YSM3	J domain-containing protein.	Similar to glucose-regulated protein; Belongs to the heat shock protein 70 family.	0.752
G2XP26_BOTF4	G2YUP2_BOTF4	G2XP26	G2YUP2	J domain-containing protein.	Similar to mitochondrial heat shock protein; Belongs to the heat shock protein 70 family.	0.743
G2XP26_BOTF4	G2YW25_BOTF4	G2XP26	G2YW25	J domain-containing protein.	Similar to DnaJ protein subfamily C member 3.	0.416
G2XPL3_BOTF4	G2YBU4_BOTF4	G2XPL3	G2YBU4	Similar to transcription factor bZIP.	Similar to DnaJ protein.	0.411
G2XPL3_BOTF4	G2YSM3_BOTF4	G2XPL3	G2YSM3	Similar to transcription factor bZIP.	Similar to glucose-regulated protein; Belongs to the heat shock protein 70 family.	0.616
G2XPL3_BOTF4	G2YTQ5_BOTF4	G2XPL3	G2YTQ5	Similar to transcription factor bZIP.	Similar to protein kinase and ribonuclease Ire1.	0.742
G2XS93_BOTF4	G2XP26_BOTF4	G2XS93	G2XP26	Uncharacterized protein.	J domain-containing protein.	0.659
G2XS93_BOTF4	G2XS94_BOTF4	G2XS93	G2XS94	Uncharacterized protein.	Similar to hypoxia up-regulated 1.	0.900
G2XS93_BOTF4	G2Y9V4_BOTF4	G2XS93	G2Y9V4	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.437
G2XS93_BOTF4	G2YAF5_BOTF4	G2XS93	G2YAF5	Uncharacterized protein.	Uncharacterized protein.	0.410
G2XS93_BOTF4	G2YB95_BOTF4	G2XS93	G2YB95	Uncharacterized protein.	Glycosyltransferase family 24 protein.	0.403
G2XS93_BOTF4	G2YBU4_BOTF4	G2XS93	G2YBU4	Uncharacterized protein.	Similar to DnaJ protein.	0.758
G2XS93_BOTF4	G2YCS4_BOTF4	G2XS93	G2YCS4	Uncharacterized protein.	Similar to heat shock protein; Belongs to the ClpA/ClpB family.	0.680
G2XS93_BOTF4	G2YPQ2_BOTF4	G2XS93	G2YPQ2	Uncharacterized protein.	Similar to misfolded glycoproteins degradation protein Yos9.	0.410
G2XS93_BOTF4	G2YSM3_BOTF4	G2XS93	G2YSM3	Uncharacterized protein.	Similar to glucose-regulated protein; Belongs to the heat shock protein 70 family.	0.974
G2XS93_BOTF4	G2YTQ5_BOTF4	G2XS93	G2YTQ5	Uncharacterized protein.	Similar to protein kinase and ribonuclease Ire1.	0.477