30 items (Botrytis cinerea T4) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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experimentally determined

Predicted Interactions

gene neighborhood

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protein homology

Your Input:
	G2XQX7_BOTF4	RING-type domain-containing protein. (395 aa)
	G2XUM9_BOTF4	Uncharacterized protein. (323 aa)
	G2XXR8_BOTF4	Uncharacterized protein. (506 aa)
	G2XXR9_BOTF4	Similar to POLR1B protein. (556 aa)
	G2XYD7_BOTF4	Similar to RNA polymerase I-specific transcription initiation factor rrn3. (675 aa)
	G2XZP4_BOTF4	Similar to RNA polymerase II transcription factor B subunit 3. (367 aa)
	G2XZW4_BOTF4	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (471 aa)
	G2Y0C6_BOTF4	Uncharacterized protein. (64 aa)
	G2Y0C7_BOTF4	Similar to RNA polymerase I-specific transcription initiation factor rrn7. (415 aa)
	G2Y1K6_BOTF4	Similar to serine/threonine-protein kinase; Belongs to the protein kinase superfamily. (400 aa)
	G2Y229_BOTF4	Similar to DNA-directed RNA polymerases I/II/III subunit. (68 aa)
	G2Y2M9_BOTF4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1703 aa)
	G2Y3D6_BOTF4	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (478 aa)
	G2Y3Q1_BOTF4	Similar to TFIIH basal transcription factor complex helicase XPB subunit. (845 aa)
	G2YG99_BOTF4	Uncharacterized protein. (472 aa)
	G2YII3_BOTF4	Similar to RNA polymerase I subunit A49. (449 aa)
	G2YKB4_BOTF4	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (151 aa)
	G2YKM0_BOTF4	Similar to metallothionein-I gene transcription activator. (78 aa)
	G2YKN8_BOTF4	Similar to transcription initiation factor TFIID. (251 aa)
	G2YQD7_BOTF4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (121 aa)
	G2YRD3_BOTF4	Similar to DNA-directed RNA polymerase I. (163 aa)
	G2YRH2_BOTF4	Similar to cyclin ccl1. (380 aa)
	G2YUQ1_BOTF4	SAP30_Sin3_bdg domain-containing protein. (185 aa)
	G2YVU5_BOTF4	SprT-like domain-containing protein. (699 aa)
	G2YW49_BOTF4	Histone H2B; Belongs to the histone H2B family. (140 aa)
	G2YZC4_BOTF4	Similar to DNA-directed RNA polymerases I and III subunit RPAC1. (389 aa)
	G2XUK9_BOTF4	Similar to transcription factor TFIIH complex subunit Tfb5. (71 aa)
	G2XTL6_BOTF4	Similar to RNA polymerase II transcription factor B subunit 4. (358 aa)
	G2XSQ8_BOTF4	Similar to RNA polymerase II transcription factor. (613 aa)
	G2Y2M6_BOTF4	Similar to DNA repair helicase RAD3. (770 aa)

Your Current Organism:

Botrytis cinerea T4

NCBI taxonomy Id: 999810
Other names: B. cinerea T4, Botryotinia fuckeliana T4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G2XQX7_BOTF4	G2XXR8_BOTF4	G2XQX7	G2XXR8	RING-type domain-containing protein.	Uncharacterized protein.	0.542
G2XQX7_BOTF4	G2XXR9_BOTF4	G2XQX7	G2XXR9	RING-type domain-containing protein.	Similar to POLR1B protein.	0.542
G2XQX7_BOTF4	G2XYD7_BOTF4	G2XQX7	G2XYD7	RING-type domain-containing protein.	Similar to RNA polymerase I-specific transcription initiation factor rrn3.	0.685
G2XQX7_BOTF4	G2XZW4_BOTF4	G2XQX7	G2XZW4	RING-type domain-containing protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.520
G2XQX7_BOTF4	G2Y2M6_BOTF4	G2XQX7	G2Y2M6	RING-type domain-containing protein.	Similar to DNA repair helicase RAD3.	0.545
G2XQX7_BOTF4	G2Y2M9_BOTF4	G2XQX7	G2Y2M9	RING-type domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.628
G2XQX7_BOTF4	G2YG99_BOTF4	G2XQX7	G2YG99	RING-type domain-containing protein.	Uncharacterized protein.	0.576
G2XQX7_BOTF4	G2YII3_BOTF4	G2XQX7	G2YII3	RING-type domain-containing protein.	Similar to RNA polymerase I subunit A49.	0.621
G2XQX7_BOTF4	G2YKB4_BOTF4	G2XQX7	G2YKB4	RING-type domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.564
G2XQX7_BOTF4	G2YKN8_BOTF4	G2XQX7	G2YKN8	RING-type domain-containing protein.	Similar to transcription initiation factor TFIID.	0.792
G2XSQ8_BOTF4	G2XTL6_BOTF4	G2XSQ8	G2XTL6	Similar to RNA polymerase II transcription factor.	Similar to RNA polymerase II transcription factor B subunit 4.	0.999
G2XSQ8_BOTF4	G2XUK9_BOTF4	G2XSQ8	G2XUK9	Similar to RNA polymerase II transcription factor.	Similar to transcription factor TFIIH complex subunit Tfb5.	0.985
G2XSQ8_BOTF4	G2XXR8_BOTF4	G2XSQ8	G2XXR8	Similar to RNA polymerase II transcription factor.	Uncharacterized protein.	0.884
G2XSQ8_BOTF4	G2XXR9_BOTF4	G2XSQ8	G2XXR9	Similar to RNA polymerase II transcription factor.	Similar to POLR1B protein.	0.884
G2XSQ8_BOTF4	G2XZP4_BOTF4	G2XSQ8	G2XZP4	Similar to RNA polymerase II transcription factor.	Similar to RNA polymerase II transcription factor B subunit 3.	0.996
G2XSQ8_BOTF4	G2XZW4_BOTF4	G2XSQ8	G2XZW4	Similar to RNA polymerase II transcription factor.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
G2XSQ8_BOTF4	G2Y1K6_BOTF4	G2XSQ8	G2Y1K6	Similar to RNA polymerase II transcription factor.	Similar to serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	0.985
G2XSQ8_BOTF4	G2Y229_BOTF4	G2XSQ8	G2Y229	Similar to RNA polymerase II transcription factor.	Similar to DNA-directed RNA polymerases I/II/III subunit.	0.971
G2XSQ8_BOTF4	G2Y2M6_BOTF4	G2XSQ8	G2Y2M6	Similar to RNA polymerase II transcription factor.	Similar to DNA repair helicase RAD3.	0.998
G2XSQ8_BOTF4	G2Y3D6_BOTF4	G2XSQ8	G2Y3D6	Similar to RNA polymerase II transcription factor.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.999