(63 nodes) Dendritic shaft network (Urocitellus parryii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSUPAP00010027998	annotation not available (96 aa)
	HCN1	Hyperpolarization activated cyclic nucleotide gated potassium channel 1. (888 aa)
	APP	Amyloid beta precursor protein. (770 aa)
	DRD1	Dopamine receptor D1. (445 aa)
	ARHGEF2	Rho/Rac guanine nucleotide exchange factor 2. (963 aa)
	ENSUPAP00010004174	annotation not available (104 aa)
	EXOC4	Exocyst complex component 4. (975 aa)
	SLC1A1	Solute carrier family 1 member 1. (523 aa)
	MPP2	Membrane palmitoylated protein 2. (569 aa)
	PSEN2	Presenilin 2. (448 aa)
	SLC1A2	Solute carrier family 1 member 2. (575 aa)
	GRIP2	Glutamate receptor interacting protein 2. (1046 aa)
	FLNA	Filamin A. (2647 aa)
	NSF	N-ethylmaleimide sensitive factor, vesicle fusing ATPase. (771 aa)
	RTN4R	Reticulon 4 receptor. (472 aa)
	NTSR2	Neurotensin receptor 2. (416 aa)
	CTNNB1	Catenin beta 1. (781 aa)
	CNIH3	Cornichon family AMPA receptor auxiliary protein 3. (160 aa)
	JPH4	Junctophilin 4. (628 aa)
	ENSUPAP00010012536	annotation not available (502 aa)
	ENSUPAP00010012530	annotation not available (101 aa)
	SYNDIG1	Synapse differentiation inducing 1. (258 aa)
	NTSR1	Neurotensin receptor 1. (418 aa)
	LPAR1	Lysophosphatidic acid receptor 1. (364 aa)
	CNIH2	Cornichon family AMPA receptor auxiliary protein 2. (160 aa)
	ABI3BP	ABI family member 3 binding protein. (1614 aa)
	GRK3	G protein-coupled receptor kinase 3. (688 aa)
	ZNF804A	Zinc finger protein 804A. (1208 aa)
	GRIA3	Glutamate ionotropic receptor AMPA type subunit 3. (888 aa)
	KIRREL3	Kirre like nephrin family adhesion molecule 3. (758 aa)
	GRM7	Glutamate metabotropic receptor 7. (922 aa)
	NLGN1	Neuroligin 1. (843 aa)
	SEZ6	Seizure related 6 homolog. (994 aa)
	ENSUPAP00010027305	annotation not available (272 aa)
	GPER1	G protein-coupled estrogen receptor 1. (375 aa)
	INPP5J	Inositol polyphosphate-5-phosphatase J. (1008 aa)
	GRIA2	Glutamate ionotropic receptor AMPA type subunit 2. (883 aa)
	ENSUPAP00010026122	annotation not available (91 aa)
	GSK3B	Glycogen synthase kinase 3 beta. (433 aa)
	CACNA1C	Calcium voltage-gated channel subunit alpha1 C. (2192 aa)
	RGS7BP	Regulator of G protein signaling 7 binding protein. (257 aa)
	BAIAP2	BAR/IMD domain containing adaptor protein 2. (522 aa)
	KCNA4	Potassium voltage-gated channel subfamily A member 4. (654 aa)
	LZTS1	Leucine zipper tumor suppressor 1. (602 aa)
	GRIA1	Glutamate ionotropic receptor AMPA type subunit 1. (906 aa)
	MAP2	Microtubule associated protein 2. (1827 aa)
	WHRN	Whirlin. (918 aa)
	PSEN1	Presenilin 1. (463 aa)
	GABBR1	Gamma-aminobutyric acid type B receptor subunit 1. (962 aa)
	HCN2	Hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2. (879 aa)
	NLGN2	Neuroligin 2. (834 aa)
	DLG3	Discs large MAGUK scaffold protein 3. (849 aa)
	DBN1	Drebrin 1. (708 aa)
	PRKAR2B	Protein kinase cAMP-dependent type II regulatory subunit beta. (417 aa)
	SYNGAP1	Synaptic Ras GTPase activating protein 1. (1343 aa)
	KIRREL1	Kirre like nephrin family adhesion molecule 1. (773 aa)
	EPHA4	EPH receptor A4. (986 aa)
	CACNA1B	Calcium voltage-gated channel subunit alpha1 B. (2340 aa)
	HOMER1	Homer scaffold protein 1. (354 aa)
	GIPC1	GIPC PDZ domain containing family member 1. (373 aa)
	MAP1A	Microtubule associated protein 1A. (3078 aa)
	ARPC2	Actin related protein 2/3 complex subunit 2. (300 aa)
	STAU2	Staufen double-stranded RNA binding protein 2. (607 aa)

Your Current Organism:

Urocitellus parryii

NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APP	CTNNB1	ENSUPAP00010004336	ENSUPAP00010013683	Amyloid beta precursor protein.	Catenin beta 1.	0.521
APP	ENSUPAP00010012536	ENSUPAP00010004336	ENSUPAP00010012536	Amyloid beta precursor protein.	annotation not available	0.653
APP	GSK3B	ENSUPAP00010004336	ENSUPAP00010025294	Amyloid beta precursor protein.	Glycogen synthase kinase 3 beta.	0.716
APP	KIRREL1	ENSUPAP00010004336	ENSUPAP00010017196	Amyloid beta precursor protein.	Kirre like nephrin family adhesion molecule 1.	0.413
APP	KIRREL3	ENSUPAP00010004336	ENSUPAP00010030391	Amyloid beta precursor protein.	Kirre like nephrin family adhesion molecule 3.	0.413
APP	LPAR1	ENSUPAP00010004336	ENSUPAP00010011354	Amyloid beta precursor protein.	Lysophosphatidic acid receptor 1.	0.483
APP	MAP2	ENSUPAP00010004336	ENSUPAP00010020324	Amyloid beta precursor protein.	Microtubule associated protein 2.	0.684
APP	NLGN1	ENSUPAP00010004336	ENSUPAP00010028827	Amyloid beta precursor protein.	Neuroligin 1.	0.401
APP	PSEN1	ENSUPAP00010004336	ENSUPAP00010019495	Amyloid beta precursor protein.	Presenilin 1.	0.987
APP	PSEN2	ENSUPAP00010004336	ENSUPAP00010002682	Amyloid beta precursor protein.	Presenilin 2.	0.935
APP	RTN4R	ENSUPAP00010004336	ENSUPAP00010013762	Amyloid beta precursor protein.	Reticulon 4 receptor.	0.462
ARHGEF2	GSK3B	ENSUPAP00010004207	ENSUPAP00010025294	Rho/Rac guanine nucleotide exchange factor 2.	Glycogen synthase kinase 3 beta.	0.455
ARPC2	BAIAP2	ENSUPAP00010014578	ENSUPAP00010024192	Actin related protein 2/3 complex subunit 2.	BAR/IMD domain containing adaptor protein 2.	0.806
ARPC2	DBN1	ENSUPAP00010014578	ENSUPAP00010017611	Actin related protein 2/3 complex subunit 2.	Drebrin 1.	0.544
BAIAP2	ARPC2	ENSUPAP00010024192	ENSUPAP00010014578	BAR/IMD domain containing adaptor protein 2.	Actin related protein 2/3 complex subunit 2.	0.806
BAIAP2	DLG3	ENSUPAP00010024192	ENSUPAP00010017908	BAR/IMD domain containing adaptor protein 2.	Discs large MAGUK scaffold protein 3.	0.602
BAIAP2	EPHA4	ENSUPAP00010024192	ENSUPAP00010017146	BAR/IMD domain containing adaptor protein 2.	EPH receptor A4.	0.538
BAIAP2	MPP2	ENSUPAP00010024192	ENSUPAP00010003346	BAR/IMD domain containing adaptor protein 2.	Membrane palmitoylated protein 2.	0.586
BAIAP2	RTN4R	ENSUPAP00010024192	ENSUPAP00010013762	BAR/IMD domain containing adaptor protein 2.	Reticulon 4 receptor.	0.423
BAIAP2	SYNGAP1	ENSUPAP00010024192	ENSUPAP00010017482	BAR/IMD domain containing adaptor protein 2.	Synaptic Ras GTPase activating protein 1.	0.585