Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V6HZ10_9LEPT | V6I7Q0_9LEPT | GCA_002009845_00113 | GCA_002009845_01910 | Unannotated protein. | Unannotated protein. | 0.847 |
V6HZ10_9LEPT | V6I842_9LEPT | GCA_002009845_00113 | GCA_002009845_00115 | Unannotated protein. | Unannotated protein. | 0.660 |
V6HZ10_9LEPT | bioA | GCA_002009845_00113 | GCA_002009845_00111 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.998 |
V6HZ10_9LEPT | bioB | GCA_002009845_00113 | GCA_002009845_00110 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.984 |
V6HZ10_9LEPT | bioD | GCA_002009845_00113 | GCA_002009845_00112 | Unannotated protein. | Unannotated protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.994 |
V6HZ10_9LEPT | gcvP | GCA_002009845_00113 | GCA_002009845_03388 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.792 |
V6HZ10_9LEPT | mdh | GCA_002009845_00113 | GCA_002009845_00114 | Unannotated protein. | Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.820 |
V6HZK0_9LEPT | bioA | GCA_002009845_02964 | GCA_002009845_00111 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.638 |
V6I7Q0_9LEPT | V6HZ10_9LEPT | GCA_002009845_01910 | GCA_002009845_00113 | Unannotated protein. | Unannotated protein. | 0.847 |
V6I7Q0_9LEPT | bioA | GCA_002009845_01910 | GCA_002009845_00111 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.817 |
V6I7Q0_9LEPT | bioD | GCA_002009845_01910 | GCA_002009845_00112 | Unannotated protein. | Unannotated protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.886 |
V6I842_9LEPT | V6HZ10_9LEPT | GCA_002009845_00115 | GCA_002009845_00113 | Unannotated protein. | Unannotated protein. | 0.660 |
V6I842_9LEPT | bioA | GCA_002009845_00115 | GCA_002009845_00111 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.658 |
V6I842_9LEPT | bioB | GCA_002009845_00115 | GCA_002009845_00110 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.546 |
V6I842_9LEPT | bioD | GCA_002009845_00115 | GCA_002009845_00112 | Unannotated protein. | Unannotated protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.658 |
V6I842_9LEPT | mdh | GCA_002009845_00115 | GCA_002009845_00114 | Unannotated protein. | Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.765 |
V6IAG1_9LEPT | argC | GCA_002009845_01780 | GCA_002009845_00081 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.591 |
V6IAG1_9LEPT | bioA | GCA_002009845_01780 | GCA_002009845_00111 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.932 |
V6IAG1_9LEPT | gcvP | GCA_002009845_01780 | GCA_002009845_03388 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.977 |
V6IAG1_9LEPT | mdh | GCA_002009845_01780 | GCA_002009845_00114 | Unannotated protein. | Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.953 |
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