STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V6I913_9LEPTUnannotated protein. (205 aa)    
Predicted Functional Partners:
V6I230_9LEPT
Unannotated protein.
  
  
  0.765
waaA
Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
       0.716
V6I1B0_9LEPT
Unannotated protein.
    
 0.705
V6I1G8_9LEPT
Unannotated protein.
    
 0.705
guaA
Unannotated protein.
    
  0.690
V6HY31_9LEPT
Unannotated protein.
    
 0.673
cinA
Unannotated protein; Belongs to the CinA family.
    
  0.671
V6I932_9LEPT
Unannotated protein.
  
     0.667
V6I701_9LEPT
Unannotated protein.
    
  0.611
V6IFG7_9LEPT
Unannotated protein.
    
  0.611
Your Current Organism:
Leptospira alexanderi
NCBI taxonomy Id: 100053
Other names: ATCC 700520, L. alexanderi, Leptospira genomosp. 2, Leptospira genomospecies 2, Leptospira genospecies 2, strain L 60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.