STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V6I400_9LEPTUnannotated protein; Belongs to the inositol monophosphatase superfamily. (282 aa)    
Predicted Functional Partners:
V6HXM0_9LEPT
Unannotated protein.
 
  
 0.982
V6I167_9LEPT
Unannotated protein; Belongs to the inositol monophosphatase superfamily.
  
  
 
0.920
V6I4K6_9LEPT
Unannotated protein.
       0.808
nusA
Unannotated protein; Participates in both transcription termination and antitermination.
   
   0.771
rpoC
Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.757
rpoB
Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.757
nusB
Unannotated protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
   
 
 0.718
V6I3B0_9LEPT
Unannotated protein.
  
 
 0.698
rpsJ
Unannotated protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
    
 
 0.684
V6IGA9_9LEPT
Unannotated protein.
     
 0.669
Your Current Organism:
Leptospira alexanderi
NCBI taxonomy Id: 100053
Other names: ATCC 700520, L. alexanderi, Leptospira genomosp. 2, Leptospira genomospecies 2, Leptospira genospecies 2, strain L 60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.