STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V6IGB8_9LEPTUnannotated protein. (159 aa)    
Predicted Functional Partners:
V6I484_9LEPT
Unannotated protein; Belongs to the SIS family. GutQ/KpsF subfamily.
     
 0.844
aroD
Unannotated protein; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.
       0.838
V6I3B0_9LEPT
Unannotated protein.
       0.838
GCA_002009845_00041
Unannotated protein.
  
 
 0.807
V6HVT4_9LEPT
Unannotated protein.
  
 
 0.807
V6I478_9LEPT
Unannotated protein.
   
 
 0.793
V6I4I8_9LEPT
Unannotated protein.
   
 
 0.793
V6IC63_9LEPT
Unannotated protein.
  
 
 0.693
V6HVC9_9LEPT
Unannotated protein.
  
 
 0.693
V6IEA8_9LEPT
Unannotated protein.
  
 
 0.693
Your Current Organism:
Leptospira alexanderi
NCBI taxonomy Id: 100053
Other names: ATCC 700520, L. alexanderi, Leptospira genomosp. 2, Leptospira genomospecies 2, Leptospira genospecies 2, strain L 60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.