STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V6HWU8_9LEPTUnannotated protein. (368 aa)    
Predicted Functional Partners:
V6IB99_9LEPT
Unannotated protein.
 
 0.921
V6I352_9LEPT
Unannotated protein.
 
 
 0.783
alaS
Unannotated protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.714
V6I3C5_9LEPT
Unannotated protein.
    
 
 0.692
V6HVB4_9LEPT
Unannotated protein.
    
 0.676
V6I9K1_9LEPT
Unannotated protein.
 
 
   0.661
V6I4F8_9LEPT
Unannotated protein.
 
 
 0.628
V6IEE2_9LEPT
Unannotated protein.
  
 
  0.623
V6HUG1_9LEPT
Unannotated protein.
 
 
 0.597
V6HXW9_9LEPT
Unannotated protein.
  
 0.596
Your Current Organism:
Leptospira alexanderi
NCBI taxonomy Id: 100053
Other names: ATCC 700520, L. alexanderi, Leptospira genomosp. 2, Leptospira genomospecies 2, Leptospira genospecies 2, strain L 60
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.