STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002009845_03629Unannotated protein. (81 aa)    
Predicted Functional Partners:
GCA_002009845_03663
Unannotated protein.
 
     0.795
GCA_002009845_00407
Unannotated protein.
  
     0.641
GCA_002009845_03630
Unannotated protein.
       0.543
V6I354_9LEPT
Unannotated protein.
  
     0.526
GCA_002009845_02393
Unannotated protein.
  
     0.525
V6I7P6_9LEPT
Unannotated protein.
  
     0.513
V6I7V7_9LEPT
Unannotated protein.
  
     0.500
GCA_002009845_00410
Unannotated protein.
  
     0.498
GCA_002009845_03196
Unannotated protein.
  
     0.446
V6I7T2_9LEPT
Unannotated protein.
  
     0.430
Your Current Organism:
Leptospira alexanderi
NCBI taxonomy Id: 100053
Other names: ATCC 700520, L. alexanderi, Leptospira genomosp. 2, Leptospira genomospecies 2, Leptospira genospecies 2, strain L 60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.