Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0103 | MDS_4357 | MDS_0103 | MDS_4357 | Nucleoside recognition domain-containing protein. | SpoVR family protein. | 0.541 |
MDS_0549 | MDS_4357 | MDS_0549 | MDS_4357 | Lipocalin family protein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. | SpoVR family protein. | 0.528 |
MDS_3244 | MDS_3245 | MDS_3244 | MDS_3245 | Hypothetical protein. | Hypothetical protein. | 0.521 |
MDS_3244 | MDS_4357 | MDS_3244 | MDS_4357 | Hypothetical protein. | SpoVR family protein. | 0.527 |
MDS_3245 | MDS_3244 | MDS_3245 | MDS_3244 | Hypothetical protein. | Hypothetical protein. | 0.521 |
MDS_3245 | MDS_4357 | MDS_3245 | MDS_4357 | Hypothetical protein. | SpoVR family protein. | 0.527 |
MDS_3278 | MDS_4355 | MDS_3278 | MDS_4355 | Protein of unknown function DUF883, ElaB. | Putative serine protein kinase, PrkA. | 0.800 |
MDS_3278 | MDS_4356 | MDS_3278 | MDS_4356 | Protein of unknown function DUF883, ElaB. | Hypothetical protein; Belongs to the UPF0229 family. | 0.520 |
MDS_3278 | MDS_4357 | MDS_3278 | MDS_4357 | Protein of unknown function DUF883, ElaB. | SpoVR family protein. | 0.698 |
MDS_3278 | MDS_4558 | MDS_3278 | MDS_4558 | Protein of unknown function DUF883, ElaB. | Hypothetical protein. | 0.471 |
MDS_4355 | MDS_3278 | MDS_4355 | MDS_3278 | Putative serine protein kinase, PrkA. | Protein of unknown function DUF883, ElaB. | 0.800 |
MDS_4355 | MDS_4356 | MDS_4355 | MDS_4356 | Putative serine protein kinase, PrkA. | Hypothetical protein; Belongs to the UPF0229 family. | 0.987 |
MDS_4355 | MDS_4357 | MDS_4355 | MDS_4357 | Putative serine protein kinase, PrkA. | SpoVR family protein. | 0.987 |
MDS_4355 | MDS_4358 | MDS_4355 | MDS_4358 | Putative serine protein kinase, PrkA. | Hypothetical protein. | 0.487 |
MDS_4355 | MDS_4558 | MDS_4355 | MDS_4558 | Putative serine protein kinase, PrkA. | Hypothetical protein. | 0.534 |
MDS_4355 | trpS | MDS_4355 | MDS_0981 | Putative serine protein kinase, PrkA. | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.469 |
MDS_4356 | MDS_3278 | MDS_4356 | MDS_3278 | Hypothetical protein; Belongs to the UPF0229 family. | Protein of unknown function DUF883, ElaB. | 0.520 |
MDS_4356 | MDS_4355 | MDS_4356 | MDS_4355 | Hypothetical protein; Belongs to the UPF0229 family. | Putative serine protein kinase, PrkA. | 0.987 |
MDS_4356 | MDS_4357 | MDS_4356 | MDS_4357 | Hypothetical protein; Belongs to the UPF0229 family. | SpoVR family protein. | 0.992 |
MDS_4356 | MDS_4358 | MDS_4356 | MDS_4358 | Hypothetical protein; Belongs to the UPF0229 family. | Hypothetical protein. | 0.626 |
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