STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2WJV6Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (535 aa)    
Predicted Functional Partners:
A0A1Y2WSG9
Uncharacterized protein.
   
 0.908
A0A1Y2WPD0
WW domain-containing protein.
    
 0.621
A0A1Y2X0V6
Uncharacterized protein.
    
 
 0.512
A0A1Y2XBS1
Serine/threonine-protein phosphatase.
    
  0.500
A0A1Y2XF50
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.500
A0A1Y2WST8
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
  0.430
A0A1Y2X581
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
   
  0.430
A0A1Y2XBP0
Serine/threonine-protein phosphatase.
    
 0.427
A0A1Y2X959
Uncharacterized protein.
    
 
 0.426
A0A1Y2WQP2
Serine/threonine-protein phosphatase.
    
  0.419
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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