STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2WM40IFRD domain-containing protein. (463 aa)    
Predicted Functional Partners:
A0A1Y2WV99
Uncharacterized protein.
    
  0.957
A0A1Y2WNH7
Ubiquitin-like domain-containing protein.
    
  0.932
A0A1Y2WR63
BZIP domain-containing protein.
    
  0.932
A0A1Y2WR84
Uncharacterized protein.
    
  0.914
A0A1Y2XFH2
Ribosomal_L2_C domain-containing protein.
    
 
 0.898
A0A1Y2X8M4
Uncharacterized protein.
   
   0.897
K445DRAFT_8305
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
    
 
 0.886
A0A1Y2X0X9
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.885
A0A1Y2XFS2
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.885
A0A1Y2XB84
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
    
 
 0.884
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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