STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2WNC1Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (592 aa)    
Predicted Functional Partners:
A0A1Y2WNR1
Uncharacterized protein.
    
 0.992
A0A1Y2X108
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.990
A0A1Y2WQN7
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.950
A0A1Y2WR96
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.942
A0A1Y2WKD2
Uncharacterized protein.
 
      0.900
A0A1Y2WQR6
GIDA_assoc domain-containing protein.
 
      0.898
A0A1Y2WSH3
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 0.897
A0A1Y2XEG8
Pep3_Vps18 domain-containing protein.
    
 0.880
A0A1Y2WXH2
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
   0.875
A0A1Y2XE49
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
   
 0.874
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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