STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2WUH1Uncharacterized protein. (87 aa)    
Predicted Functional Partners:
A0A1Y2WW07
Uncharacterized protein.
    
 
 0.950
A0A1Y2X2H3
Uncharacterized protein.
   
 
 0.911
A0A1Y2X8W6
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.911
A0A1Y2WPX0
YTH domain-containing protein.
   
 
 0.869
A0A1Y2X1E0
Uncharacterized protein.
    
 
 0.853
A0A1Y2WPI7
Importin N-terminal domain-containing protein.
    
 
 0.845
A0A1Y2WVH4
Uncharacterized protein.
   
 
 0.733
A0A1Y2X938
SF3b1 domain-containing protein.
   
    0.706
A0A1Y2X406
RRM domain-containing protein.
    
 
 0.669
A0A1Y2X6W9
HRDC domain-containing protein.
   
 
 0.659
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.