STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2WVF1Protein YOP1. (176 aa)    
Predicted Functional Partners:
SEY1
Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.
    
 
 0.892
A0A1Y2X0R4
Reticulon-like protein.
    
 
 0.850
A0A1Y2X6B1
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 
 0.587
A0A1Y2XD79
ML domain-containing protein.
   
    0.582
A0A1Y2WJL6
Zinc_ribbon_10 domain-containing protein.
    
 
 0.573
A0A1Y2WY16
Uncharacterized protein.
    
 
 0.554
A0A1Y2WLK3
Peroxin/Ferlin domain-containing protein.
    
 
 0.532
A0A1Y2X367
Uncharacterized protein.
   
 
 0.471
A0A1Y2WMP3
Uncharacterized protein.
    
 
 0.470
A0A1Y2WS24
Uncharacterized protein.
    
 
 0.467
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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