STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2WVM0Uncharacterized protein. (344 aa)    
Predicted Functional Partners:
A0A1Y2WTN0
Glycosyltransferase family 1 protein.
   
 0.882
A0A1Y2XFG9
PfkB domain-containing protein.
    
 0.823
A0A1Y2WJQ4
Uncharacterized protein.
    
 0.810
A0A1Y2WU25
Uncharacterized protein.
    
 0.737
A0A1Y2WTX3
Glycosyltransferase family 33 protein.
    
 0.705
A0A1Y2X2D2
PfkB domain-containing protein.
    
 0.609
A0A1Y2XDB0
RibD_C domain-containing protein.
    
 0.609
A0A1Y2XFT9
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
 0.609
A0A1Y2X5Q3
Glycosyltransferase family 4 protein.
    
 0.554
A0A1Y2XCS3
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
    
 0.523
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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