STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2WXQ5Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (785 aa)    
Predicted Functional Partners:
A0A1Y2XCI3
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
   
 0.978
A0A1Y2WX02
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
   
 0.970
A0A1Y2WYS8
Transket_pyr domain-containing protein.
   
 
 0.963
A0A1Y2WNL0
Citrate synthase; Belongs to the citrate synthase family.
  
 0.960
A0A1Y2X7J3
Citrate synthase; Belongs to the citrate synthase family.
  
 0.957
A0A1Y2X891
Citrate synthase; Belongs to the citrate synthase family.
  
 0.956
A0A1Y2X416
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.951
A0A1Y2X6M8
Uncharacterized protein.
  
 0.949
A0A1Y2X8Q9
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.944
A0A1Y2WJW9
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 
0.928
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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