STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2WXX8Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (299 aa)    
Predicted Functional Partners:
A0A1Y2X7T0
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
   
 
 0.903
A0A1Y2WM96
UBIQUITIN_CONJUGAT_2 domain-containing protein.
 
      0.899
A0A1Y2WKP3
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
  
 
0.840
A0A1Y2WZ69
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.806
A0A1Y2X6M2
PEP_hydrolase domain-containing protein.
 
      0.671
A0A1Y2WKR9
Uncharacterized protein.
 
      0.653
A0A1Y2WLR7
Cytochrome c domain-containing protein.
   
 
 0.648
A0A1Y2WQH3
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 
 0.629
A0A1Y2WY16
Uncharacterized protein.
 
    
 0.600
A0A1Y2WWK8
FAD-binding FR-type domain-containing protein.
    
 
 0.538
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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