STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2WZ89Mannan endo-1,6-alpha-mannosidase. (454 aa)    
Predicted Functional Partners:
A0A1Y2X9Q4
Uncharacterized protein.
    
 0.759
A0A1Y2WMF5
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.751
A0A1Y2XBS6
Uncharacterized protein.
  
 
   0.545
K445DRAFT_7238
Protein kinase domain-containing protein.
    
 
 0.471
A0A1Y2WUM7
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.443
A0A1Y2WXX1
TRP_N domain-containing protein.
  
     0.429
A0A1Y2XFD1
DMAP-interaction domain-containing protein.
  
  
  0.414
A0A1Y2X389
ATG11 domain-containing protein.
    
 
 0.413
A0A1Y2WRS7
TRP_N domain-containing protein.
  
     0.409
A0A1Y2X4D5
SMI1_KNR4 domain-containing protein.
  
 
   0.407
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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