STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2WZV6PseudoU_synth_1 domain-containing protein. (554 aa)    
Predicted Functional Partners:
A0A1Y2XAE6
TruB_N domain-containing protein.
   
 0.840
A0A1Y2WU88
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.802
A0A1Y2XBF4
PUA domain-containing protein.
   
 0.796
A0A1Y2WWN2
RPOLD domain-containing protein.
  
  
 0.771
A0A1Y2WYW4
RPOLD domain-containing protein.
  
  
 0.771
A0A1Y2X2P8
Uncharacterized protein.
   
   0.731
TRM82
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.715
A0A1Y2XE73
Uncharacterized protein.
   
    0.713
A0A1Y2X1E3
Uncharacterized protein.
   
    0.712
A0A1Y2XFE7
TRUD domain-containing protein.
   
 
 0.708
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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