STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2X1S4Peptide hydrolase; Belongs to the peptidase M28 family. (509 aa)    
Predicted Functional Partners:
A0A1Y2WSB4
UBA domain-containing protein.
    
  0.549
A0A1Y2X578
Aminopeptidase.
    
 0.476
A0A1Y2X960
Aminopeptidase.
    
 0.476
A0A1Y2WJQ7
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
   
 
  0.464
A0A1Y2WQX3
PCI domain-containing protein.
     
 0.438
A0A1Y2WMM6
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
 0.421
A0A1Y2WXW2
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
 0.421
A0A1Y2WYK0
Ubiquitin-like domain-containing protein.
    
 0.421
A0A1Y2WYW5
PHB domain-containing protein.
    
  0.402
A0A1Y2WSC5
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.401
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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