STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2X2D4Aminotran_5 domain-containing protein. (385 aa)    
Predicted Functional Partners:
A0A1Y2X265
TPR_REGION domain-containing protein.
    
 0.969
A0A1Y2WSG7
Aminotran_1_2 domain-containing protein.
  
 0.922
A0A1Y2WLQ4
Beta_elim_lyase domain-containing protein.
    
 0.914
A0A1Y2WVP0
Uncharacterized protein.
   
 0.914
A0A1Y2XB92
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
   
 
 0.912
A0A1Y2X089
Malate synthase; Belongs to the malate synthase family.
  
 
 0.911
A0A1Y2WMU4
Tryptophan synthase.
  
 
 0.907
A0A1Y2WSQ8
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.897
A0A1Y2X1N7
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.897
A0A1Y2WT11
Isocitrate lyase.
  
 
 0.895
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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