STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2X3F5Uncharacterized protein. (434 aa)    
Predicted Functional Partners:
A0A1Y2X1H0
UPF0020 domain-containing protein.
   
  
 0.586
A0A1Y2XAA1
Uncharacterized protein.
   
  
 0.568
A0A1Y2XF38
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
 
 0.546
TSR3
Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family.
   
  
 0.533
A0A1Y2WSS2
Uncharacterized protein.
   
 
 0.516
A0A1Y2WZV6
PseudoU_synth_1 domain-containing protein.
   
 
 0.516
A0A1Y2XEX9
AA_TRNA_LIGASE_II domain-containing protein.
   
 
 0.502
A0A1Y2X379
TRAM domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
  
  
 0.483
A0A1Y2WXC9
AA_TRNA_LIGASE_II domain-containing protein.
   
 
 0.481
A0A1Y2WYX7
Uncharacterized protein.
  
    0.478
Your Current Organism:
Daldinia sp. EC12
NCBI taxonomy Id: 1001832
Other names: D. sp. EC12
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